Literature DB >> 18275182

Electrostatic free energy and its variations in implicit solvent models.

Jianwei Che1, Joachim Dzubiella, Bo Li, J Andrew McCammon.   

Abstract

A mean-field approach to the electrostatics for solutes in electrolyte solution is revisited and rigorously justified. In this approach, an electrostatic free energy functional is constructed that depends solely on the local ionic concentrations. The unique set of such concentrations that minimize this free energy are given by the usual Boltzmann distributions through the electrostatic potential which is determined by the Poisson-Boltzmann equation. This approach is then applied to the variational implicit solvent description of the solvation of molecules [Dzubiella, Swanson, McCammon, Phys. Rev. Lett. 2006, 96, 087802; J. Chem. Phys. 2006, 124, 084905]. Care is taken for the singularities of the potential generated by the solute point charges. The variation of the electrostatic free energy with respect to the location change of solute-solvent interfaces, that is, dielectric boundaries, is derived. Such a variation gives rise to the normal component of the effective surface force per unit surface area that is shown to be attractive to the fixed point charges in the solutes. Two examples of applications are given to validate the analytical results. The first one is a one-dimensional model system resembling, for example, a charged solute or cavity in a one-dimensional channel. The second one, which is of its own interest, is the electrostatic free energy of a charged spherical solute immersed in an ionic solution. An analytical formula is derived for the Debye-Hückel approximation of the free energy, extending the classical Born's formula to one that includes ionic concentrations. Variations of the nonlinear Poisson-Boltzmann free energy are also obtained.

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Year:  2008        PMID: 18275182     DOI: 10.1021/jp7101012

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  33 in total

1.  Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids.

Authors:  Bob Eisenberg; Yunkyong Hyon; Chun Liu
Journal:  J Chem Phys       Date:  2010-09-14       Impact factor: 3.488

2.  A self-consistent phase-field approach to implicit solvation of charged molecules with Poisson-Boltzmann electrostatics.

Authors:  Hui Sun; Jiayi Wen; Yanxiang Zhao; Bo Li; J Andrew McCammon
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

3.  Electrostatic forces in the Poisson-Boltzmann systems.

Authors:  Li Xiao; Qin Cai; Xiang Ye; Jun Wang; Ray Luo
Journal:  J Chem Phys       Date:  2013-09-07       Impact factor: 3.488

4.  Rigorous treatment of electrostatics for spatially varying dielectrics based on energy minimization.

Authors:  O I Obolensky; T P Doerr; R Ray; Yi-Kuo Yu
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-04-07

5.  Numerical interpretation of molecular surface field in dielectric modeling of solvation.

Authors:  Changhao Wang; Li Xiao; Ray Luo
Journal:  J Comput Chem       Date:  2017-03-20       Impact factor: 3.376

6.  Dielectric pressure in continuum electrostatic solvation of biomolecules.

Authors:  Qin Cai; Xiang Ye; Ray Luo
Journal:  Phys Chem Chem Phys       Date:  2012-10-23       Impact factor: 3.676

7.  Stochastic level-set variational implicit-solvent approach to solute-solvent interfacial fluctuations.

Authors:  Shenggao Zhou; Hui Sun; Li-Tien Cheng; Joachim Dzubiella; Bo Li; J Andrew McCammon
Journal:  J Chem Phys       Date:  2016-08-07       Impact factor: 3.488

8.  Exploring accurate Poisson-Boltzmann methods for biomolecular simulations.

Authors:  Changhao Wang; Jun Wang; Qin Cai; Zhilin Li; Hong-Kai Zhao; Ray Luo
Journal:  Comput Theor Chem       Date:  2013-11-15       Impact factor: 1.926

9.  LS-VISM: A software package for analysis of biomolecular solvation.

Authors:  Shenggao Zhou; Li-Tien Cheng; Hui Sun; Jianwei Che; Joachim Dzubiella; Bo Li; J Andrew McCammon
Journal:  J Comput Chem       Date:  2015-03-12       Impact factor: 3.376

10.  Ionic Size Effects: Generalized Boltzmann Distributions, Counterion Stratification, and Modified Debye Length.

Authors:  Bo Liu; Pei Liu; Zhenli Xu; Shenggao Zhou
Journal:  Nonlinearity       Date:  2013-10-01
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