Literature DB >> 18273891

Conformations of beta-amino acid residues in peptides: X-ray diffraction studies of peptides containing the achiral residue 1-aminocyclohexaneacetic acid, beta3,3Ac6c.

Prema G Vasudev1, Rajkishor Rai, Narayanaswamy Shamala, Padmanabhan Balaram.   

Abstract

The conformational preferences of the 3,3-disubstituted beta-amino acid residue, 1-aminocyclohexaneacetic acid (beta3,3Ac6c) have been investigated by determining the crystal structures of the parent amino acid, the hydrochloride derivative, 10 protected derivatives and di and tripeptides. The symmetrical cyclohexyl substituent at the beta-position restricts the values of the torsion angles phi (N--C(beta)) and theta (C(beta)--C(alpha)) to approximately gauche values (+/-60 degrees ). Relatively few intramolecularly hydrogen bonded conformations are observed. In the dipeptide Boc-beta(3,3)Ac6c-beta(3,3)Ac6c-NHMe a C6 hydrogen bond is observed. In Piv-Pro-beta(3,3)Ac6c-NHMe a C11 hydrogen bonded hybrid alphabeta turn is characterized. In a majority of cases the amino group occupies the axial position in the cyclohexane ring. The conformations observed are compared with crystallographically observed structures for other beta-residues, including beta(2,2)Ac6c.

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Year:  2008        PMID: 18273891     DOI: 10.1002/bip.20957

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  3 in total

1.  2-(1-Amino-4-tert-butyl-cyclo-hex-yl)acetic acid (tBu-β(3,3)-Ac6c) hemihydrate.

Authors:  Naiem Ahmad Wani; Vivek K Gupta; Rajni Kant; Subrayashastry Aravinda; Rajkishor Rai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-15

2.  2-[(1R*,4R*)-1,4-Dihy-droxy-cyclo-hex-yl]acetic acid.

Authors:  Mohammad Arfan; Syed Hamid Hussain; M Nawaz Tahir; Jamal Rafique; Farzana Shaheen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-26

3.  Conformation and crystal structures of 1-amino-cyclo-hexa-neacetic acid (β(3,3)Ac6c) in N-protected derivatives.

Authors:  Naiem Ahmad Wani; Vivek K Gupta; Rajni Kant; Subrayashastry Aravinda; Rajkishor Rai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-10-04
  3 in total

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