Literature DB >> 18272377

Structure and function of enzymes involved in the biosynthesis of phenylpropanoids.

J-L Ferrer1, M B Austin, C Stewart, J P Noel.   

Abstract

As a major component of plant specialized metabolism, phenylpropanoid biosynthetic pathways provide anthocyanins for pigmentation, flavonoids such as flavones for protection against UV photodamage, various flavonoid and isoflavonoid inducers of Rhizobium nodulation genes, polymeric lignin for structural support and assorted antimicrobial phytoalexins. As constituents of plant-rich diets and an assortment of herbal medicinal agents, the phenylpropanoids exhibit measurable cancer chemopreventive, antimitotic, estrogenic, antimalarial, antioxidant and antiasthmatic activities. The health benefits of consuming red wine, which contains significant amounts of 3,4',5-trihydroxystilbene (resveratrol) and other phenylpropanoids, highlight the increasing awareness in the medical community and the public at large as to the potential dietary importance of these plant derived compounds. As recently as a decade ago, little was known about the three-dimensional structure of the enzymes involved in these highly branched biosynthetic pathways. Ten years ago, we initiated X-ray crystallographic analyses of key enzymes of this pathway, complemented by biochemical and enzyme engineering studies. We first investigated chalcone synthase (CHS), the entry point of the flavonoid pathway, and its close relative stilbene synthase (STS). Work soon followed on the O-methyl transferases (OMTs) involved in modifications of chalcone, isoflavonoids and metabolic precursors of lignin. More recently, our groups and others have extended the range of phenylpropanoid pathway structural investigations to include the upstream enzymes responsible for the initial recruitment of phenylalanine and tyrosine, as well as a number of reductases, acyltransferases and ancillary tailoring enzymes of phenylpropanoid-derived metabolites. These structure-function studies collectively provide a comprehensive view of an important aspect of phenylpropanoid metabolism. More specifically, these atomic resolution insights into the architecture and mechanistic underpinnings of phenylpropanoid metabolizing enzymes contribute to our understanding of the emergence and on-going evolution of specialized phenylpropanoid products, and underscore the molecular basis of metabolic biodiversity at the chemical level. Finally, the detailed knowledge of the structure, function and evolution of these enzymes of specialized metabolism provide a set of experimental templates for the enzyme and metabolic engineering of production platforms for diverse novel compounds with desirable dietary and medicinal properties.

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Year:  2007        PMID: 18272377      PMCID: PMC2860624          DOI: 10.1016/j.plaphy.2007.12.009

Source DB:  PubMed          Journal:  Plant Physiol Biochem        ISSN: 0981-9428            Impact factor:   4.270


  76 in total

Review 1.  Structure and mechanism of chalcone synthase-like polyketide synthases.

Authors:  J M Jez; J L Ferrer; M E Bowman; M B Austin; J Schröder; R A Dixon; J P Noel
Journal:  J Ind Microbiol Biotechnol       Date:  2001-12       Impact factor: 3.346

2.  Structural basis for dual functionality of isoflavonoid O-methyltransferases in the evolution of plant defense responses.

Authors:  Chang-Jun Liu; Bettina E Deavours; Stéphane B Richard; Jean-Luc Ferrer; Jack W Blount; David Huhman; Richard A Dixon; Joseph P Noel
Journal:  Plant Cell       Date:  2006-12-15       Impact factor: 11.277

3.  Crystal structures of a multifunctional triterpene/flavonoid glycosyltransferase from Medicago truncatula.

Authors:  Hui Shao; Xianzhi He; Lahoucine Achnine; Jack W Blount; Richard A Dixon; Xiaoqiang Wang
Journal:  Plant Cell       Date:  2005-10-07       Impact factor: 11.277

4.  Evolution of plant defense mechanisms. Relationships of phenylcoumaran benzylic ether reductases to pinoresinol-lariciresinol and isoflavone reductases.

Authors:  D R Gang; H Kasahara; Z Q Xia; K Vander Mijnsbrugge; G Bauw; W Boerjan; M Van Montagu; L B Davin; N G Lewis
Journal:  J Biol Chem       Date:  1999-03-12       Impact factor: 5.157

5.  Production of plant-specific flavanones by Escherichia coli containing an artificial gene cluster.

Authors:  Eui Il Hwang; Masafumi Kaneko; Yasuo Ohnishi; Sueharu Horinouchi
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

6.  Role of anthocyanidin reductase, encoded by BANYULS in plant flavonoid biosynthesis.

Authors:  De-Yu Xie; Shashi B Sharma; Nancy L Paiva; Daneel Ferreira; Richard A Dixon
Journal:  Science       Date:  2003-01-17       Impact factor: 47.728

7.  Recombinant pinoresinol-lariciresinol reductases from western red cedar (Thuja plicata) catalyze opposite enantiospecific conversions.

Authors:  M Fujita; D R Gang; L B Davin; N G Lewis
Journal:  J Biol Chem       Date:  1999-01-08       Impact factor: 5.157

8.  Regulation of enzymes involved in lignin biosynthesis: induction of O-methyltransferase mRNAs during the hypersensitive reaction of tobacco to tobacco mosaic virus.

Authors:  E Jaeck; B Dumas; P Geoffroy; N Favet; D Inzé; M Van Montagu; B Fritig; M Legrand
Journal:  Mol Plant Microbe Interact       Date:  1992 Jul-Aug       Impact factor: 4.171

Review 9.  Molecular adaptation and the origin of land plants.

Authors:  Elizabeth R Waters
Journal:  Mol Phylogenet Evol       Date:  2003-12       Impact factor: 4.286

10.  Mammalian microsomal cytochrome P450 monooxygenase: structural adaptations for membrane binding and functional diversity.

Authors:  P A Williams; J Cosme; V Sridhar; E F Johnson; D E McRee
Journal:  Mol Cell       Date:  2000-01       Impact factor: 17.970

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  162 in total

1.  Evolution of the Cinnamyl/Sinapyl Alcohol Dehydrogenase (CAD/SAD) gene family: the emergence of real lignin is associated with the origin of Bona Fide CAD.

Authors:  Dong-Mei Guo; Jin-Hua Ran; Xiao-Quan Wang
Journal:  J Mol Evol       Date:  2010-08-19       Impact factor: 2.395

2.  SG2-Type R2R3-MYB Transcription Factor MYB15 Controls Defense-Induced Lignification and Basal Immunity in Arabidopsis.

Authors:  William R Chezem; Altamash Memon; Fu-Shuang Li; Jing-Ke Weng; Nicole K Clay
Journal:  Plant Cell       Date:  2017-07-21       Impact factor: 11.277

3.  Disruption of poly(ADP-ribosyl)ation mechanisms alters responses of Arabidopsis to biotic stress.

Authors:  Lori Adams-Phillips; Amy G Briggs; Andrew F Bent
Journal:  Plant Physiol       Date:  2009-11-04       Impact factor: 8.340

4.  Changes in rice allelopathy and rhizosphere microflora by inhibiting rice phenylalanine ammonia-lyase gene expression.

Authors:  Changxun Fang; Yuee Zhuang; Tiecheng Xu; Yingzhe Li; Yue Li; Wenxiong Lin
Journal:  J Chem Ecol       Date:  2013-02-06       Impact factor: 2.626

5.  Genome-wide characterization of phenylalanine ammonia-lyase gene family in watermelon (Citrullus lanatus).

Authors:  Chun-Juan Dong; Qing-Mao Shang
Journal:  Planta       Date:  2013-04-02       Impact factor: 4.116

6.  Identification of two novel inactive DFR-A alleles responsible for failure to produce anthocyanin and development of a simple PCR-based molecular marker for bulb color selection in onion (Allium cepa L.).

Authors:  Sunggil Kim; Doohyun Baek; Dong Youn Cho; Eul-Tai Lee; Moo-Kyoung Yoon
Journal:  Theor Appl Genet       Date:  2009-02-24       Impact factor: 5.699

7.  Interaction of Selected Phenylpropenes with Dipalmitoylphosphatidylcholine Membrane and Their Relevance to Antibacterial Activity.

Authors:  Riham Gharib; Amal Najjar; Lizette Auezova; Catherine Charcosset; Hélène Greige-Gerges
Journal:  J Membr Biol       Date:  2017-04-22       Impact factor: 1.843

8.  Expression patterns of an isoflavone reductase-like gene and its possible roles in secondary metabolism in Ginkgo biloba.

Authors:  Cheng Hua; Li Linling; Xu Feng; Wang Yan; Yuan Honghui; Wu Conghua; Wang Shaobing; Liao Zhiqin; Hua Juan; Wang Yuping; Cheng Shuiyuan; Cao Fuliang
Journal:  Plant Cell Rep       Date:  2013-03-05       Impact factor: 4.570

9.  Proteomic analysis of shoot tissue during photoperiod induced growth cessation in V. riparia Michx. grapevines.

Authors:  Kim J Victor; Anne Y Fennell; Jérôme Grimplet
Journal:  Proteome Sci       Date:  2010-08-12       Impact factor: 2.480

10.  Identification and characterization of pseudogenes in the rice gene complement.

Authors:  Françoise Thibaud-Nissen; Shu Ouyang; C Robin Buell
Journal:  BMC Genomics       Date:  2009-07-16       Impact factor: 3.969

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