Literature DB >> 18270511

The ARID domain of the H3K4 demethylase RBP2 binds to a DNA CCGCCC motif.

Shengjiang Tu1, Yu-Ching Teng, Chunhua Yuan, Ying-Ta Wu, Meng-Yu Chan, An-Ning Cheng, Po-Hsun Lin, Li-Jung Juan, Ming-Daw Tsai.   

Abstract

The histone H3 lysine 4 demethylase RBP2 contains a DNA binding domain, the AT-rich interaction domain (ARID). We solved the structure of ARID by NMR, identified its DNA binding motif (CCGCCC) and characterized the binding contacts. Immunofluorescence and luciferase assays indicated that ARID is required for RBP2 demethylase activity in cells and that DNA recognition is essential to regulate transcription.

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Year:  2008        PMID: 18270511     DOI: 10.1038/nsmb.1400

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  49 in total

1.  Solution NMR structure of the ARID domain of human AT-rich interactive domain-containing protein 3A: a human cancer protein interaction network target.

Authors:  Gaohua Liu; Yuanpeng J Huang; Rong Xiao; Dongyan Wang; Thomas B Acton; Gaetano T Montelione
Journal:  Proteins       Date:  2010-07

2.  The JmjN domain of Jhd2 is important for its protein stability, and the plant homeodomain (PHD) finger mediates its chromatin association independent of H3K4 methylation.

Authors:  Fu Huang; Mahesh B Chandrasekharan; Yi-Chun Chen; Srividya Bhaskara; Scott W Hiebert; Zu-Wen Sun
Journal:  J Biol Chem       Date:  2010-06-09       Impact factor: 5.157

Review 3.  Molecular mechanisms and potential functions of histone demethylases.

Authors:  Susanne Marije Kooistra; Kristian Helin
Journal:  Nat Rev Mol Cell Biol       Date:  2012-04-04       Impact factor: 94.444

4.  Histone demethylase KDM5A is an integral part of the core Notch-RBP-J repressor complex.

Authors:  Robert Liefke; Franz Oswald; Cristobal Alvarado; Dolores Ferres-Marco; Gerhard Mittler; Patrick Rodriguez; Maria Dominguez; Tilman Borggrefe
Journal:  Genes Dev       Date:  2010-03-15       Impact factor: 11.361

5.  Selective targeting of histone methylation.

Authors:  Abul B M M K Islam; William F Richter; Nuria Lopez-Bigas; Elizaveta V Benevolenskaya
Journal:  Cell Cycle       Date:  2011-02-01       Impact factor: 4.534

Review 6.  Histone demethylases and cancer.

Authors:  Sotirios C Kampranis; Philip N Tsichlis
Journal:  Adv Cancer Res       Date:  2009       Impact factor: 6.242

7.  Lysine-specific demethylase 1 cooperates with BRAF-histone deacetylase complex 80 to enhance HIV-1 Tat-mediated transactivation.

Authors:  Yu Liu; Deyu Zhou; Di Qi; Jiabin Feng; Zhou Liu; Yue Hu; Wenyuan Shen; Chang Liu; Xiaohong Kong
Journal:  Virus Genes       Date:  2018-08-13       Impact factor: 2.332

8.  Histone demethylase RBP2 is critical for breast cancer progression and metastasis.

Authors:  Jian Cao; Zongzhi Liu; William K C Cheung; Minghui Zhao; Sophia Y Chen; Siew Wee Chan; Carmen J Booth; Don X Nguyen; Qin Yan
Journal:  Cell Rep       Date:  2014-02-27       Impact factor: 9.423

9.  Essential functions of the histone demethylase lid.

Authors:  Ling Li; Christina Greer; Robert N Eisenman; Julie Secombe
Journal:  PLoS Genet       Date:  2010-11-24       Impact factor: 5.917

10.  Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human.

Authors:  Shuye Pu; Andrei L Turinsky; James Vlasblom; Tuan On; Xuejian Xiong; Andrew Emili; Zhaolei Zhang; Jack Greenblatt; John Parkinson; Shoshana J Wodak
Journal:  PLoS One       Date:  2010-11-29       Impact factor: 3.240

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