Literature DB >> 18260008

Nucleic acid isothermal amplification technologies: a review.

Pooria Gill1, Amir Ghaemi.   

Abstract

Nucleic acid amplification technologies are used in the field of molecular biology and recombinant DNA technologies. These techniques are used as leading methods in detecting and analyzing a small quantity of nucleic acids. The polymerase chain reaction (PCR) is the most widely used method for DNA amplification for detection and identification of infectious diseases, genetic disorders and other research purposes. However, it requires a thermocycling machine to separate two DNA strands and then amplify the required fragment. Novel developments in molecular biology of DNA synthesis in vivo demonstrate the possibility of amplifying DNA in isothermal conditions without the need of a thermocycling apparatus. DNA polymerase replicates DNA with the aid of various accessory proteins. Recent identification of these proteins has enabled development of new in vitro isothermal DNA amplification methods, mimicking these in vivo mechanisms. There are several types of isothermal nucleic acid amplification methods such as transcription mediated amplification, nucleic acid sequence-based amplification, signal mediated amplification of RNA technology, strand displacement amplification, rolling circle amplification, loop-mediated isothermal amplification of DNA, isothermal multiple displacement amplification, helicase-dependent amplification, single primer isothermal amplification, and circular helicase-dependent amplification. In this article, we review these isothermal nucleic acid amplification technologies and their applications in molecular biological studies.

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Year:  2008        PMID: 18260008     DOI: 10.1080/15257770701845204

Source DB:  PubMed          Journal:  Nucleosides Nucleotides Nucleic Acids        ISSN: 1525-7770            Impact factor:   1.381


  108 in total

1.  Recombinase polymerase amplification assay for rapid detection of Francisella tularensis.

Authors:  Milena Euler; Yongjie Wang; Peter Otto; Herbert Tomaso; Raquel Escudero; Pedro Anda; Frank T Hufert; Manfred Weidmann
Journal:  J Clin Microbiol       Date:  2012-04-18       Impact factor: 5.948

2.  Improvement of HRV quantification using cRNA-based standards for real time RT-PCR.

Authors:  Maria Elena Terlizzi; Massimiliano Bergallo; Sara Astegiano; Francesca Sidoti; Stefano Gambarino; Paolo Solidoro; Cristina Costa; Rossana Cavallo
Journal:  Mol Biotechnol       Date:  2011-05       Impact factor: 2.695

Review 3.  Differential scanning calorimetry techniques: applications in biology and nanoscience.

Authors:  Pooria Gill; Tahereh Tohidi Moghadam; Bijan Ranjbar
Journal:  J Biomol Tech       Date:  2010-12

4.  Lack of correlation between reaction speed and analytical sensitivity in isothermal amplification reveals the value of digital methods for optimization: validation using digital real-time RT-LAMP.

Authors:  Eugenia M Khorosheva; Mikhail A Karymov; David A Selck; Rustem F Ismagilov
Journal:  Nucleic Acids Res       Date:  2015-09-10       Impact factor: 16.971

5.  Isothermal amplification of long DNA segments by quadruplex priming amplification.

Authors:  Levan Lomidze; Tyler H Williford; Karin Musier-Forsyth; Besik Kankia
Journal:  Anal Methods       Date:  2018-05-29       Impact factor: 2.896

6.  A nanodiagnostic colorimetric assay for 18S rRNA of Leishmania pathogens using nucleic acid sequence-based amplification and gold nanorods.

Authors:  Alireza Niazi; Oghol-Niaz Jorjani; Hassan Nikbakht; Pooria Gill
Journal:  Mol Diagn Ther       Date:  2013-12       Impact factor: 4.074

Review 7.  New tools and new biology: recent miniaturized systems for molecular and cellular biology.

Authors:  Morgan Hamon; Jong Wook Hong
Journal:  Mol Cells       Date:  2013-12-02       Impact factor: 5.034

8.  Rapid DNA detection by beacon-assisted detection amplification.

Authors:  Ashley R Connolly; Matt Trau
Journal:  Nat Protoc       Date:  2011-05-12       Impact factor: 13.491

9.  Development of a panel of recombinase polymerase amplification assays for detection of common bacterial urinary tract infection pathogens.

Authors:  B Raja; H J Goux; A Marapadaga; S Rajagopalan; K Kourentzi; R C Willson
Journal:  J Appl Microbiol       Date:  2017-08       Impact factor: 3.772

Review 10.  Rapid and quantitative detection of hepatitis B virus.

Authors:  Yue-Ping Liu; Chun-Yan Yao
Journal:  World J Gastroenterol       Date:  2015-11-14       Impact factor: 5.742

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