Literature DB >> 18250337

Biosynthetic origin of natural products isolated from marine microorganism-invertebrate assemblages.

T Luke Simmons1, R Cameron Coates, Benjamin R Clark, Niclas Engene, David Gonzalez, Eduardo Esquenazi, Pieter C Dorrestein, William H Gerwick.   

Abstract

In all probability, natural selection began as ancient marine microorganisms were required to compete for limited resources. These pressures resulted in the evolution of diverse genetically encoded small molecules with a variety of ecological and metabolic roles. Remarkably, many of these same biologically active molecules have potential utility in modern medicine and biomedical research. The most promising of these natural products often derive from organisms richly populated by associated microorganisms (e.g., marine sponges and ascidians), and often there is great uncertainty about which organism in these assemblages is making these intriguing metabolites. To use the molecular machinery responsible for the biosynthesis of potential drug-lead natural products, new tools must be applied to delineate their genetic and enzymatic origins. The aim of this perspective is to highlight both traditional and emerging techniques for the localization of metabolic pathways within complex marine environments. Examples are given from the literature as well as recent proof-of-concept experiments from the authors' laboratories.

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Year:  2008        PMID: 18250337      PMCID: PMC2290810          DOI: 10.1073/pnas.0709851105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  73 in total

1.  New diffusion-edited NMR experiments to expedite the dereplication of known compounds from natural product mixtures.

Authors:  R T Williamson; E L Chapin; A W Carr; J R Gilbert; P R Graupner; P Lewer; P McKamey; J R Carney; W H Gerwick
Journal:  Org Lett       Date:  2000-02-10       Impact factor: 6.005

2.  Two classes of metabolites from Theonella swinhoei are localized in distinct populations of bacterial symbionts.

Authors:  C A Bewley; N D Holland; D J Faulkner
Journal:  Experientia       Date:  1996-07-15

Review 3.  Marine natural products as anticancer drugs.

Authors:  T Luke Simmons; Eric Andrianasolo; Kerry McPhail; Patricia Flatt; William H Gerwick
Journal:  Mol Cancer Ther       Date:  2005-02       Impact factor: 6.261

4.  Microbial genomics as a guide to drug discovery and structural elucidation: ECO-02301, a novel antifungal agent, as an example.

Authors:  James B McAlpine; Brian O Bachmann; Mahmood Piraee; Steve Tremblay; Anne-Marie Alarco; Emmanuel Zazopoulos; Chris M Farnet
Journal:  J Nat Prod       Date:  2005-04       Impact factor: 4.050

5.  Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples.

Authors:  Akira Motoyama; John D Venable; Cristian I Ruse; John R Yates
Journal:  Anal Chem       Date:  2006-07-15       Impact factor: 6.986

6.  Characterization of the initial enzymatic steps of barbamide biosynthesis.

Authors:  Patricia M Flatt; Susan J O'Connell; Kerry L McPhail; Gloria Zeller; Christine L Willis; David H Sherman; William H Gerwick
Journal:  J Nat Prod       Date:  2006-06       Impact factor: 4.050

7.  Identification of the putative bryostatin polyketide synthase gene cluster from "Candidatus Endobugula sertula", the uncultivated microbial symbiont of the marine bryozoan Bugula neritina.

Authors:  Sebastian Sudek; Nicole B Lopanik; Laura E Waggoner; Mark Hildebrand; Christine Anderson; Haibin Liu; Amrish Patel; David H Sherman; Margo G Haygood
Journal:  J Nat Prod       Date:  2007-01       Impact factor: 4.050

8.  Diversity of heterotrophic nitrogen fixation genes in a marine cyanobacterial mat.

Authors:  J P Zehr; M Mellon; S Braun; W Litaker; T Steppe; H W Paerl
Journal:  Appl Environ Microbiol       Date:  1995-07       Impact factor: 4.792

9.  Isolation of dolastatin 10 from the marine cyanobacterium Symploca species VP642 and total stereochemistry and biological evaluation of its analogue symplostatin 1.

Authors:  H Luesch; R E Moore; V J Paul; S L Mooberry; T H Corbett
Journal:  J Nat Prod       Date:  2001-07       Impact factor: 4.050

10.  Copulation of ultra-violet-irradiated and unirradiated Saccharomyces cells of different ploidy.

Authors:  K Haefnar; H Kirschfeld
Journal:  Nature       Date:  1966-07-16       Impact factor: 49.962

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  67 in total

1.  Marine natural products: totally tubular peptide synthesis.

Authors:  Craig J Forsyth
Journal:  Nat Chem       Date:  2010-04       Impact factor: 24.427

2.  Spongosine production by a Vibrio harveyi strain associated with the sponge Tectitethya crypta.

Authors:  Matthew J Bertin; Sarah L Schwartz; John Lee; Anton Korobeynikov; Pieter C Dorrestein; Lena Gerwick; William H Gerwick
Journal:  J Nat Prod       Date:  2015-02-10       Impact factor: 4.050

3.  Phylogeny-guided isolation of ethyl tumonoate A from the marine cyanobacterium cf. Oscillatoria margaritifera.

Authors:  Niclas Engene; Hyukjae Choi; Eduardo Esquenazi; Tara Byrum; Francisco A Villa; Zhengyu Cao; Thomas F Murray; Pieter C Dorrestein; Lena Gerwick; William H Gerwick
Journal:  J Nat Prod       Date:  2011-07-13       Impact factor: 4.050

4.  Chemical ecology in retrospect and prospect.

Authors:  Jerrold Meinwald; Thomas Eisner
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-19       Impact factor: 11.205

5.  Probing marine natural product defenses with DESI-imaging mass spectrometry.

Authors:  Eduardo Esquenazi; Pieter C Dorrestein; William H Gerwick
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-28       Impact factor: 11.205

6.  Distribution and possible function of the marine alkaloid, norzoanthamine, in the zoanthid Zoanthus sp. using MALDI imaging mass spectrometry.

Authors:  Takahisa Genji; Seketsu Fukuzawa; Kazuo Tachibana
Journal:  Mar Biotechnol (NY)       Date:  2009-07-03       Impact factor: 3.619

7.  Underestimated biodiversity as a major explanation for the perceived rich secondary metabolite capacity of the cyanobacterial genus Lyngbya.

Authors:  Niclas Engene; Hyukjae Choi; Eduardo Esquenazi; Erin C Rottacker; Mark H Ellisman; Pieter C Dorrestein; William H Gerwick
Journal:  Environ Microbiol       Date:  2011-04-07       Impact factor: 5.491

Review 8.  Mass spectrometry of natural products: current, emerging and future technologies.

Authors:  Amina Bouslimani; Laura M Sanchez; Neha Garg; Pieter C Dorrestein
Journal:  Nat Prod Rep       Date:  2014-05-07       Impact factor: 13.423

9.  Polyketide assembly lines of uncultivated sponge symbionts from structure-based gene targeting.

Authors:  Katja M Fisch; Cristian Gurgui; Nina Heycke; Sonia A van der Sar; Sally A Anderson; Victoria L Webb; Stefan Taudien; Matthias Platzer; Brent K Rubio; Sarah J Robinson; Phillip Crews; Jörn Piel
Journal:  Nat Chem Biol       Date:  2009-07       Impact factor: 15.040

10.  Palmyramide A, a cyclic depsipeptide from a Palmyra Atoll collection of the marine cyanobacterium Lyngbya majuscula.

Authors:  Masatoshi Taniguchi; Joshawna K Nunnery; Niclas Engene; Eduardo Esquenazi; Tara Byrum; Pieter C Dorrestein; William H Gerwick
Journal:  J Nat Prod       Date:  2010-03-26       Impact factor: 4.050

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