Literature DB >> 18245462

A first-generation multiplex biomarker analysis of urine for the early detection of prostate cancer.

Bharathi Laxman1, David S Morris, Jianjun Yu, Javed Siddiqui, Jie Cao, Rohit Mehra, Robert J Lonigro, Alex Tsodikov, John T Wei, Scott A Tomlins, Arul M Chinnaiyan.   

Abstract

Although prostate-specific antigen (PSA) serum level is currently the standard of care for prostate cancer screening in the United States, it lacks ideal specificity and additional biomarkers are needed to supplement or potentially replace serum PSA testing. Emerging evidence suggests that monitoring the noncoding RNA transcript PCA3 in urine may be useful in detecting prostate cancer in patients with elevated PSA levels. Here, we show that a multiplex panel of urine transcripts outperforms PCA3 transcript alone for the detection of prostate cancer. We measured the expression of seven putative prostate cancer biomarkers, including PCA3, in sedimented urine using quantitative PCR on a cohort of 234 patients presenting for biopsy or radical prostatectomy. By univariate analysis, we found that increased GOLPH2, SPINK1, and PCA3 transcript expression and TMPRSS2:ERG fusion status were significant predictors of prostate cancer. Multivariate regression analysis showed that a multiplexed model, including these biomarkers, outperformed serum PSA or PCA3 alone in detecting prostate cancer. The area under the receiver-operating characteristic curve was 0.758 for the multiplexed model versus 0.662 for PCA3 alone (P = 0.003). The sensitivity and specificity for the multiplexed model were 65.9% and 76.0%, respectively, and the positive and negative predictive values were 79.8% and 60.8%, respectively. Taken together, these results provide the framework for the development of highly optimized, multiplex urine biomarker tests for more accurate detection of prostate cancer.

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Year:  2008        PMID: 18245462      PMCID: PMC2998181          DOI: 10.1158/0008-5472.CAN-07-3224

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  29 in total

1.  Whole transcriptome amplification for gene expression profiling and development of molecular archives.

Authors:  Scott A Tomlins; Rohit Mehra; Daniel R Rhodes; Rajal B Shah; Mark A Rubin; Eric Bruening; Vladimir Makarov; Arul M Chinnaiyan
Journal:  Neoplasia       Date:  2006-02       Impact factor: 5.715

2.  APTIMA PCA3 molecular urine test: development of a method to aid in the diagnosis of prostate cancer.

Authors:  Jack Groskopf; Sheila M J Aubin; Ina Lim Deras; Amy Blase; Sharon Bodrug; Craig Clark; Steven Brentano; Jeannette Mathis; Jimmykim Pham; Troels Meyer; Michelle Cass; Petrea Hodge; Maria Luz Macairan; Leonard S Marks; Harry Rittenhouse
Journal:  Clin Chem       Date:  2006-04-20       Impact factor: 8.327

3.  A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer.

Authors:  Soonmyung Paik; Steven Shak; Gong Tang; Chungyeul Kim; Joffre Baker; Maureen Cronin; Frederick L Baehner; Michael G Walker; Drew Watson; Taesung Park; William Hiller; Edwin R Fisher; D Lawrence Wickerham; John Bryant; Norman Wolmark
Journal:  N Engl J Med       Date:  2004-12-10       Impact factor: 91.245

4.  Noninvasive detection of TMPRSS2:ERG fusion transcripts in the urine of men with prostate cancer.

Authors:  Bharathi Laxman; Scott A Tomlins; Rohit Mehra; David S Morris; Lei Wang; Beth E Helgeson; Rajal B Shah; Mark A Rubin; John T Wei; Arul M Chinnaiyan
Journal:  Neoplasia       Date:  2006-10       Impact factor: 5.715

5.  Quantitative multi-gene expression profiling of primary prostate cancer.

Authors:  Uta Schmidt; Susanne Fuessel; Rainer Koch; Gustavo B Baretton; Andrea Lohse; Silke Tomasetti; Susanne Unversucht; Michael Froehner; Manfred P Wirth; Axel Meye
Journal:  Prostate       Date:  2006-10-01       Impact factor: 4.104

6.  PCA3 molecular urine assay for prostate cancer in men undergoing repeat biopsy.

Authors:  Leonard S Marks; Yves Fradet; Ina Lim Deras; Amy Blase; Jeannette Mathis; Sheila M J Aubin; Anthony T Cancio; Marie Desaulniers; William J Ellis; Harry Rittenhouse; Jack Groskopf
Journal:  Urology       Date:  2007-03       Impact factor: 2.649

7.  The time-resolved fluorescence-based PCA3 test on urinary sediments after digital rectal examination; a Dutch multicenter validation of the diagnostic performance.

Authors:  Martijn P M Q van Gils; Daphne Hessels; Onno van Hooij; Sander A Jannink; W Pim Peelen; Suzanne L J Hanssen; J Alfred Witjes; Erik B Cornel; Herbert F M Karthaus; Geert A H J Smits; Gerhard A Dijkman; Peter F A Mulders; Jack A Schalken
Journal:  Clin Cancer Res       Date:  2007-02-01       Impact factor: 12.531

Review 8.  The epidemiology of prostate cancer part I: descriptive epidemiology.

Authors:  O W Brawley; K Knopf; R Merrill
Journal:  Semin Urol Oncol       Date:  1998-11

9.  Detection of TMPRSS2-ERG fusion transcripts and prostate cancer antigen 3 in urinary sediments may improve diagnosis of prostate cancer.

Authors:  Daphne Hessels; Frank P Smit; Gerald W Verhaegh; J Alfred Witjes; Erik B Cornel; Jack A Schalken
Journal:  Clin Cancer Res       Date:  2007-09-01       Impact factor: 12.531

10.  TMPRSS2-ERG fusion prostate cancer: an early molecular event associated with invasion.

Authors:  Sven Perner; Juan-Miguel Mosquera; Francesca Demichelis; Matthias D Hofer; Pamela L Paris; Jeff Simko; Colin Collins; Tarek A Bismar; Arul M Chinnaiyan; Angelo M De Marzo; Mark A Rubin
Journal:  Am J Surg Pathol       Date:  2007-06       Impact factor: 6.394

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  146 in total

Review 1.  Molecular alterations in prostate cancer as diagnostic, prognostic, and therapeutic targets.

Authors:  Bora Gurel; Tsuyoshi Iwata; Cheryl M Koh; Srinivasan Yegnasubramanian; William G Nelson; Angelo M De Marzo
Journal:  Adv Anat Pathol       Date:  2008-11       Impact factor: 3.875

2.  Isomer-specific chromatographic profiling yields highly sensitive and specific potential N-glycan biomarkers for epithelial ovarian cancer.

Authors:  Serenus Hua; Cynthia C Williams; Lauren M Dimapasoc; Grace S Ro; Sureyya Ozcan; Suzanne Miyamoto; Carlito B Lebrilla; Hyun Joo An; Gary S Leiserowitz
Journal:  J Chromatogr A       Date:  2013-01-11       Impact factor: 4.759

3.  A new RNA-seq method to detect the transcription and non-coding RNA in prostate cancer.

Authors:  Xiao-Ming Zhang; Zhong-Wei Ma; Qiang Wang; Jian-Ning Wang; Ji-Wei Yang; Xian-Duo Li; Hao Li; Tong-Yi Men
Journal:  Pathol Oncol Res       Date:  2013-09-17       Impact factor: 3.201

4.  Golgi protein GOLM1 is a tissue and urine biomarker of prostate cancer.

Authors:  Sooryanarayana Varambally; Bharathi Laxman; Rohit Mehra; Qi Cao; Saravana M Dhanasekaran; Scott A Tomlins; Jill Granger; Adaikkalam Vellaichamy; Arun Sreekumar; Jianjun Yu; Wenjuan Gu; Ronglai Shen; Debashis Ghosh; Lorinda M Wright; Raleigh D Kladney; Rainer Kuefer; Mark A Rubin; Claus J Fimmel; Arul M Chinnaiyan
Journal:  Neoplasia       Date:  2008-11       Impact factor: 5.715

5.  SLC45A3-ELK4 is a novel and frequent erythroblast transformation-specific fusion transcript in prostate cancer.

Authors:  David S Rickman; Dorothee Pflueger; Benjamin Moss; Vanessa E VanDoren; Chen X Chen; Alexandre de la Taille; Rainer Kuefer; Ashutosh K Tewari; Sunita R Setlur; Francesca Demichelis; Mark A Rubin
Journal:  Cancer Res       Date:  2009-03-17       Impact factor: 12.701

6.  ERG rearrangement metastasis patterns in locally advanced prostate cancer.

Authors:  Sven Perner; Maria A Svensson; Ruhella R Hossain; John R Day; Jack Groskopf; Ryan C Slaughter; Analee R Jarleborn; Matthias D Hofer; Rainer Kuefer; Francesca Demichelis; David S Rickman; Mark A Rubin
Journal:  Urology       Date:  2010-04       Impact factor: 2.649

Review 7.  Recurrent gene fusions in prostate cancer.

Authors:  Chandan Kumar-Sinha; Scott A Tomlins; Arul M Chinnaiyan
Journal:  Nat Rev Cancer       Date:  2008-06-19       Impact factor: 60.716

8.  ETS gene fusions and prostate cancer.

Authors:  Wei Huang; Michelle Waknitz
Journal:  Am J Transl Res       Date:  2009-05-25       Impact factor: 4.060

9.  Cancer-associated changes in the expression of TMPRSS2-ERG, PCA3, and SPINK1 in histologically benign tissue from cancerous vs noncancerous prostatectomy specimens.

Authors:  Riina-Minna Väänänen; Hans Lilja; Leni Kauko; Pauliina Helo; Henna Kekki; Angel M Cronin; Andrew J Vickers; Martti Nurmi; Kalle Alanen; Anders Bjartell; Kim Pettersson
Journal:  Urology       Date:  2014-02       Impact factor: 2.649

10.  Therapeutic Targeting of Golgi Phosphoprotein 2 (GOLPH2) with Armed Antibodies: A Preclinical Study of Anti-GOLPH2 Antibody Drug Conjugates in Lung and Colorectal Cancer Models of Patient Derived Xenografts (PDX).

Authors:  Heike Liewen; Norbert Markuly; Heinz Läubli; Yang Liu; Matthias S Matter; Nora Liewen; Christoph Renner; Alfred Zippelius; Frank Stenner
Journal:  Target Oncol       Date:  2019-10       Impact factor: 4.493

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