Literature DB >> 18243121

A 5' splice site enhances the recruitment of basal transcription initiation factors in vivo.

Christian Kroun Damgaard1, Søren Kahns, Søren Lykke-Andersen, Anders Lade Nielsen, Torben Heick Jensen, Jørgen Kjems.   

Abstract

Transcription and pre-mRNA splicing are interdependent events. Although mechanisms governing the effects of transcription on splicing are becoming increasingly clear, the means by which splicing affects transcription remain elusive. Using cell lines stably expressing HIV-1 or beta-globin mRNAs, harboring wild-type or various 5' splice site mutations, we demonstrate a strong positive correlation between splicing efficiency and transcription activity. Interestingly, a 5' splice site can stimulate transcription even in the absence of splicing. Chromatin immunoprecipitation experiments show enhanced promoter docking of transcription initiation factors TFIID, TFIIB, and TFIIH on a gene containing a functional 5' splice site. In addition to their promoter association, the TFIID and TFIIH components, TBP and p89, are specifically recruited to the 5' splice site region. Our data suggest a model in which a promoter-proximal 5' splice site via its U1 snRNA interaction can feed back to stimulate transcription initiation by enhancing pre-initiation complex assembly.

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Year:  2008        PMID: 18243121     DOI: 10.1016/j.molcel.2007.11.035

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  87 in total

1.  Excessive RNA splicing and inhibition of HIV-1 replication induced by modified U1 small nuclear RNAs.

Authors:  Dibyakanti Mandal; Zehua Feng; C Martin Stoltzfus
Journal:  J Virol       Date:  2010-10-06       Impact factor: 5.103

2.  Nascent-seq indicates widespread cotranscriptional pre-mRNA splicing in Drosophila.

Authors:  Yevgenia L Khodor; Joseph Rodriguez; Katharine C Abruzzi; Chih-Hang Anthony Tang; Michael T Marr; Michael Rosbash
Journal:  Genes Dev       Date:  2011-12-01       Impact factor: 11.361

3.  TCERG1 regulates alternative splicing of the Bcl-x gene by modulating the rate of RNA polymerase II transcription.

Authors:  Marta Montes; Alexandre Cloutier; Noemí Sánchez-Hernández; Laetitia Michelle; Bruno Lemieux; Marco Blanchette; Cristina Hernández-Munain; Benoit Chabot; Carlos Suñé
Journal:  Mol Cell Biol       Date:  2011-12-12       Impact factor: 4.272

4.  Chromatin density and splicing destiny: on the cross-talk between chromatin structure and splicing.

Authors:  Schraga Schwartz; Gil Ast
Journal:  EMBO J       Date:  2010-04-20       Impact factor: 11.598

5.  A U1-U2 snRNP interaction network during intron definition.

Authors:  Wei Shao; Hyun-Soo Kim; Yang Cao; Yong-Zhen Xu; Charles C Query
Journal:  Mol Cell Biol       Date:  2011-11-07       Impact factor: 4.272

6.  In new company: U1 snRNA associates with TAF15.

Authors:  Jennifer F Kugel; James A Goodrich
Journal:  EMBO Rep       Date:  2009-04-17       Impact factor: 8.807

7.  Cotranscriptional splicing potentiates the mRNA production from a subset of estradiol-stimulated genes.

Authors:  Danielle Bittencourt; Martin Dutertre; Gabriel Sanchez; Jérôme Barbier; Lise Gratadou; Didier Auboeuf
Journal:  Mol Cell Biol       Date:  2008-07-21       Impact factor: 4.272

8.  Role of cellular RNA processing factors in human immunodeficiency virus type 1 mRNA metabolism, replication, and infectivity.

Authors:  Joseph A Jablonski; Massimo Caputi
Journal:  J Virol       Date:  2008-11-12       Impact factor: 5.103

9.  An insulator with barrier-element activity promotes alpha-spectrin gene expression in erythroid cells.

Authors:  Patrick G Gallagher; Douglas G Nilson; Laurie A Steiner; Yelena D Maksimova; Jolinta Y Lin; David M Bodine
Journal:  Blood       Date:  2008-11-13       Impact factor: 22.113

Review 10.  Dynamic integration of splicing within gene regulatory pathways.

Authors:  Ulrich Braunschweig; Serge Gueroussov; Alex M Plocik; Brenton R Graveley; Benjamin J Blencowe
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

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