Literature DB >> 18242152

Comparative analysis of in vivo interactions between Rev1 protein and other Y-family DNA polymerases in animals and yeasts.

J Nicole Kosarek1, Rachel V Woodruff, Amanda Rivera-Begeman, Caixia Guo, Sanjay D'Souza, Eugene V Koonin, Graham C Walker, Errol C Friedberg.   

Abstract

Eukaryotes are endowed with multiple specialized DNA polymerases, some (if not all) of which are believed to play important roles in the tolerance of base damage during DNA replication. Among these DNA polymerases, Rev1 protein (a deoxycytidyl transferase) from vertebrates interacts with several other specialized polymerases via a highly conserved C-terminal region. The present studies assessed whether these interactions are retained in more experimentally tractable model systems, including yeasts, flies, and the nematode C. elegans. We observed a physical interaction between Rev1 protein and other Y-family polymerases in the fruit fly Drosophila melanogaster. However, despite the fact that the C-terminal region of Drosophila and yeast Rev1 are conserved from vertebrates to a similar extent, such interactions were not observed in Saccharomyces cerevisiae or Schizosaccharomyces pombe. With respect to regions in specialized DNA polymerases that are required for interaction with Rev1, we find predicted disorder to be an underlying structural commonality. The results of this study suggest that special consideration should be exercised when making mechanistic extrapolations regarding translesion DNA synthesis from one eukaryotic system to another.

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Year:  2008        PMID: 18242152      PMCID: PMC2363158          DOI: 10.1016/j.dnarep.2007.11.016

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  53 in total

Review 1.  Trading places: how do DNA polymerases switch during translesion DNA synthesis?

Authors:  Errol C Friedberg; Alan R Lehmann; Robert P P Fuchs
Journal:  Mol Cell       Date:  2005-05-27       Impact factor: 17.970

Review 2.  Suffering in silence: the tolerance of DNA damage.

Authors:  Errol C Friedberg
Journal:  Nat Rev Mol Cell Biol       Date:  2005-12       Impact factor: 94.444

3.  Distinct roles for Rev1p and Rev7p during translesion synthesis in Saccharomyces cerevisiae.

Authors:  K Baynton; A Bresson-Roy; R P Fuchs
Journal:  Mol Microbiol       Date:  1999-10       Impact factor: 3.501

4.  The Escherichia coli SOS mutagenesis proteins UmuD and UmuD' interact physically with the replicative DNA polymerase.

Authors:  M D Sutton; T Opperman; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

5.  UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V.

Authors:  M Tang; X Shen; E G Frank; M O'Donnell; R Woodgate; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

6.  Specificity of DNA lesion bypass by the yeast DNA polymerase eta.

Authors:  F Yuan; Y Zhang; D K Rajpal; X Wu; D Guo; M Wang; J S Taylor; Z Wang
Journal:  J Biol Chem       Date:  2000-03-17       Impact factor: 5.157

7.  The relative roles in vivo of Saccharomyces cerevisiae Pol eta, Pol zeta, Rev1 protein and Pol32 in the bypass and mutation induction of an abasic site, T-T (6-4) photoadduct and T-T cis-syn cyclobutane dimer.

Authors:  Peter E M Gibbs; John McDonald; Roger Woodgate; Christopher W Lawrence
Journal:  Genetics       Date:  2004-11-01       Impact factor: 4.562

Review 8.  Gene regulation by the glucocorticoid receptor: structure:function relationship.

Authors:  Raj Kumar; E Brad Thompson
Journal:  J Steroid Biochem Mol Biol       Date:  2005-04-22       Impact factor: 4.292

9.  The catalytic activity of REV1 is employed during immunoglobulin gene diversification in DT40.

Authors:  Anna-Laura Ross; Julian E Sale
Journal:  Mol Immunol       Date:  2005-11-02       Impact factor: 4.407

10.  Vertebrate DNA damage tolerance requires the C-terminus but not BRCT or transferase domains of REV1.

Authors:  Anna-Laura Ross; Laura J Simpson; Julian E Sale
Journal:  Nucleic Acids Res       Date:  2005-03-01       Impact factor: 16.971

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  28 in total

1.  Multifaceted recognition of vertebrate Rev1 by translesion polymerases ζ and κ.

Authors:  Jessica Wojtaszek; Jiangxin Liu; Sanjay D'Souza; Su Wang; Yaohua Xue; Graham C Walker; Pei Zhou
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

Review 2.  Eukaryotic translesion polymerases and their roles and regulation in DNA damage tolerance.

Authors:  Lauren S Waters; Brenda K Minesinger; Mary Ellen Wiltrout; Sanjay D'Souza; Rachel V Woodruff; Graham C Walker
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 3.  Y-family DNA polymerases in mammalian cells.

Authors:  Caixia Guo; J Nicole Kosarek-Stancel; Tie-Shan Tang; Errol C Friedberg
Journal:  Cell Mol Life Sci       Date:  2009-04-15       Impact factor: 9.261

Review 4.  The repeatability of genome-wide mutation rate and spectrum estimates.

Authors:  Megan G Behringer; David W Hall
Journal:  Curr Genet       Date:  2016-02-26       Impact factor: 3.886

5.  Structural basis of ubiquitin recognition by translesion synthesis DNA polymerase ι.

Authors:  Gaofeng Cui; Robert C Benirschke; Han-Fang Tuan; Nenad Juranić; Slobodan Macura; Maria Victoria Botuyan; Georges Mer
Journal:  Biochemistry       Date:  2010-11-04       Impact factor: 3.162

6.  REV7 is required for anaphase-promoting complex-dependent ubiquitination and degradation of translesion DNA polymerase REV1.

Authors:  Abel Chiu-Shun Chun; Kin-Hang Kok; Dong-Yan Jin
Journal:  Cell Cycle       Date:  2012-01-15       Impact factor: 4.534

7.  Structural basis of Rev1-mediated assembly of a quaternary vertebrate translesion polymerase complex consisting of Rev1, heterodimeric polymerase (Pol) ζ, and Pol κ.

Authors:  Jessica Wojtaszek; Chul-Jin Lee; Sanjay D'Souza; Brenda Minesinger; Hyungjin Kim; Alan D D'Andrea; Graham C Walker; Pei Zhou
Journal:  J Biol Chem       Date:  2012-08-02       Impact factor: 5.157

Review 8.  Translesion DNA synthesis and mutagenesis in eukaryotes.

Authors:  Julian E Sale
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

Review 9.  DNA repair mechanisms and the bypass of DNA damage in Saccharomyces cerevisiae.

Authors:  Serge Boiteux; Sue Jinks-Robertson
Journal:  Genetics       Date:  2013-04       Impact factor: 4.562

Review 10.  Translesion DNA Synthesis in Cancer: Molecular Mechanisms and Therapeutic Opportunities.

Authors:  Maroof K Zafar; Robert L Eoff
Journal:  Chem Res Toxicol       Date:  2017-09-28       Impact factor: 3.739

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