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Literature DB >> 18235428

Reannotation of array probes at NCBI's GEO database.

Tanya Barrett, Ron Edgar.

Abstract

Mesh：

Substances：
DNA Probes

Year: 2008 PMID： 18235428 DOI： 10.1038/nmeth0208-117b

Source DB: PubMed Journal: Nat Methods ISSN： 1548-7091 Impact factor: 28.547

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Cited

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11 in total

1. DSGeo: software tools for cross-platform analysis of gene expression data in GEO.

Authors: Ronilda Lacson; Erik Pitzer; Jihoon Kim; Pedro Galante; Christian Hinske; Lucila Ohno-Machado
Journal: J Biomed Inform Date: 2010-05-07 Impact factor: 6.317

2. Additional layers of gene regulatory complexity from recently discovered microRNA mechanisms.

Authors: Clark D Jeffries; Howard M Fried; Diana O Perkins
Journal: Int J Biochem Cell Biol Date: 2009-02-20 Impact factor: 5.085

3. NCBI GEO: archive for high-throughput functional genomic data.

Authors: Tanya Barrett; Dennis B Troup; Stephen E Wilhite; Pierre Ledoux; Dmitry Rudnev; Carlos Evangelista; Irene F Kim; Alexandra Soboleva; Maxim Tomashevsky; Kimberly A Marshall; Katherine H Phillippy; Patti M Sherman; Rolf N Muertter; Ron Edgar
Journal: Nucleic Acids Res Date: 2008-10-21 Impact factor: 16.971

4. Re-annotation is an essential step in systems biology modeling of functional genomics data.

Authors: Bart H J van den Berg; Fiona M McCarthy; Susan J Lamont; Shane C Burgess
Journal: PLoS One Date: 2010-05-14 Impact factor: 3.240

5. Differentially Expressed Gene Screening, Biological Function Enrichment, and Correlation with Prognosis in Non-Small Cell Lung Cancer.

Authors: He Huang; Qingdong Huang; Tingyu Tang; Xiaoxi Zhou; Liang Gu; Xiaoling Lu; Fang Liu
Journal: Med Sci Monit Date: 2019-06-10

10. Development and Validation of Epigenetic Modification-Related Signals for the Diagnosis and Prognosis of Hepatocellular Carcinoma.

Authors: Maoqing Lu; Sheng Qiu; Xianyao Jiang; Diguang Wen; Ronggui Zhang; Zuojin Liu
Journal: Front Oncol Date: 2021-06-17 Impact factor: 6.244

Reannotation of array probes at NCBI's GEO database.

1. DSGeo: software tools for cross-platform analysis of gene expression data in GEO.

2. Additional layers of gene regulatory complexity from recently discovered microRNA mechanisms.

3. NCBI GEO: archive for high-throughput functional genomic data.

4. Re-annotation is an essential step in systems biology modeling of functional genomics data.

5. Differentially Expressed Gene Screening, Biological Function Enrichment, and Correlation with Prognosis in Non-Small Cell Lung Cancer.

6. Role of downregulated ADARB1 in lung squamous cell carcinoma.

7. Evaluation of a large-scale biomedical data annotation initiative.

8. Inferring gene regulatory networks by singular value decomposition and gravitation field algorithm.

9. Function of low ADARB1 expression in lung adenocarcinoma.

10. Development and Validation of Epigenetic Modification-Related Signals for the Diagnosis and Prognosis of Hepatocellular Carcinoma.