Literature DB >> 20460095

Additional layers of gene regulatory complexity from recently discovered microRNA mechanisms.

Clark D Jeffries1, Howard M Fried, Diana O Perkins.   

Abstract

In recent years microRNAs have become recognized as pervasive, versatile agents of gene regulation. Some widely embraced rules involving Watson-Crick hybridization of microRNAs with mRNAs have generated great interest as scientists envision potential RNA cargoes for gene therapy and other experimental systems. However, while researchers ardently seek simplifying principles, nature seems very uncooperative. This article reviews some small RNA mechanisms that potentially regulate genes and which are not covered by previous microRNAs characterizations. In addition, we report here results of fluorescence microscopy experiments to directly demonstrate nuclear import of small RNAs equal in length to typical mature microRNAs, implying that gene regulation at the locus of transcription might be possible. Copyright 2009 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 20460095      PMCID: PMC2902613          DOI: 10.1016/j.biocel.2009.02.006

Source DB:  PubMed          Journal:  Int J Biochem Cell Biol        ISSN: 1357-2725            Impact factor:   5.085


  42 in total

1.  Absence of non-specific effects of RNA interference triggered by long double-stranded RNA in mouse oocytes.

Authors:  Paula Stein; Fanyi Zeng; Hua Pan; Richard M Schultz
Journal:  Dev Biol       Date:  2005-09-09       Impact factor: 3.582

2.  Antisense transcription in the mammalian transcriptome.

Authors:  S Katayama; Y Tomaru; T Kasukawa; K Waki; M Nakanishi; M Nakamura; H Nishida; C C Yap; M Suzuki; J Kawai; H Suzuki; P Carninci; Y Hayashizaki; C Wells; M Frith; T Ravasi; K C Pang; J Hallinan; J Mattick; D A Hume; L Lipovich; S Batalov; P G Engström; Y Mizuno; M A Faghihi; A Sandelin; A M Chalk; S Mottagui-Tabar; Z Liang; B Lenhard; C Wahlestedt
Journal:  Science       Date:  2005-09-02       Impact factor: 47.728

3.  The antisense strand of small interfering RNAs directs histone methylation and transcriptional gene silencing in human cells.

Authors:  Marc S Weinberg; Louisa M Villeneuve; Ali Ehsani; Mohammed Amarzguioui; Lars Aagaard; Zhao-Xia Chen; Arthur D Riggs; John J Rossi; Kevin V Morris
Journal:  RNA       Date:  2005-12-22       Impact factor: 4.942

4.  Systematic discovery of the grammar of translational inhibition by RNA hairpins.

Authors:  Clark Jeffries; Diana O Perkins; Michael Jarstfer
Journal:  J Theor Biol       Date:  2006-01-05       Impact factor: 2.691

5.  Evidence that miRNAs are different from other RNAs.

Authors:  B H Zhang; X P Pan; S B Cox; G P Cobb; T A Anderson
Journal:  Cell Mol Life Sci       Date:  2006-01       Impact factor: 9.261

6.  Alu elements within human mRNAs are probable microRNA targets.

Authors:  Neil R Smalheiser; Vetle I Torvik
Journal:  Trends Genet       Date:  2006-08-17       Impact factor: 11.639

7.  Abundant transcripts from retrotransposons are unstable in fully grown mouse oocytes.

Authors:  Mareike Puschendorf; Paula Stein; Edward J Oakeley; Richard M Schultz; Antoine H F M Peters; Petr Svoboda
Journal:  Biochem Biophys Res Commun       Date:  2006-06-27       Impact factor: 3.575

8.  Involvement of AGO1 and AGO2 in mammalian transcriptional silencing.

Authors:  Bethany A Janowski; Kenneth E Huffman; Jacob C Schwartz; Rosalyn Ram; Robert Nordsell; David S Shames; John D Minna; David R Corey
Journal:  Nat Struct Mol Biol       Date:  2006-08-27       Impact factor: 15.369

9.  L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells.

Authors:  Nuo Yang; Haig H Kazazian
Journal:  Nat Struct Mol Biol       Date:  2006-08-27       Impact factor: 15.369

10.  Alu elements contain many binding sites for transcription factors and may play a role in regulation of developmental processes.

Authors:  Paz Polak; Eytan Domany
Journal:  BMC Genomics       Date:  2006-06-01       Impact factor: 3.969

View more
  8 in total

1.  Nuclear and cytoplasmic localization of neural stem cell microRNAs.

Authors:  Clark D Jeffries; Howard M Fried; Diana O Perkins
Journal:  RNA       Date:  2011-03-01       Impact factor: 4.942

2.  Arsenic-exposed Keratinocytes Exhibit Differential microRNAs Expression Profile; Potential Implication of miR-21, miR-200a and miR-141 in Melanoma Pathway.

Authors:  Horacio Gonzalez; Carolina Lema; Robert A Kirken; Rosa A Maldonado; Armando Varela-Ramirez; Renato J Aguilera
Journal:  Clin Cancer Drugs       Date:  2015

Review 3.  Regulation of eukaryotic gene expression by the untranslated gene regions and other non-coding elements.

Authors:  Lucy W Barrett; Sue Fletcher; Steve D Wilton
Journal:  Cell Mol Life Sci       Date:  2012-04-27       Impact factor: 9.261

4.  Non-coding-regulatory regions of human brain genes delineated by bacterial artificial chromosome knock-in mice.

Authors:  Jean-François Schmouth; Mauro Castellarin; Stéphanie Laprise; Kathleen G Banks; Russell J Bonaguro; Simone C McInerny; Lisa Borretta; Mahsa Amirabbasi; Andrea J Korecki; Elodie Portales-Casamar; Gary Wilson; Lisa Dreolini; Steven J M Jones; Wyeth W Wasserman; Daniel Goldowitz; Robert A Holt; Elizabeth M Simpson
Journal:  BMC Biol       Date:  2013-10-14       Impact factor: 7.431

5.  Integration of microRNAome, proteomics and metabolomics to analyze arsenic-induced malignant cell transformation.

Authors:  Youyou Zhou; Yanfu Wang; Juan Su; Zheng Wu; Chao Wang; Weiming Zhong; Xiaomei Liu; Linhui Cui; Xiaoyu Zhou; Yufang Ma; Yi Xin; Jianglin Zhang; Lisha Wu; Xing Hu; Xiang Chen; Cong Peng; MingYang Gao
Journal:  Oncotarget       Date:  2017-06-27

6.  A comprehensive characterization of the nuclear microRNA repertoire of post-mitotic neurons.

Authors:  Sharof A Khudayberdiev; Federico Zampa; Marek Rajman; Gerhard Schratt
Journal:  Front Mol Neurosci       Date:  2013-11-26       Impact factor: 5.639

Review 7.  MicroRNAs of the miR379-410 cluster: New players in embryonic neurogenesis and regulators of neuronal function.

Authors:  Jennifer Winter
Journal:  Neurogenesis (Austin)       Date:  2015-03-04

8.  Identification of miR-29b targets using 3-cyanovinylcarbazole containing mimics.

Authors:  Anupma Choudhary; Darya P Vanichkina; Christine Ender; Joanna Crawford; Gregory J Baillie; Andrew D Calcino; Kelin Ru; Ryan J Taft
Journal:  RNA       Date:  2017-12-15       Impact factor: 4.942

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.