Literature DB >> 18234817

Energetics of hydrophobic matching in lipid-protein interactions.

Derek Marsh1.   

Abstract

Lipid chain length modulates the activity of transmembrane proteins by mismatch between the hydrophobic span of the protein and that of the lipid membrane. Relative binding affinities of lipids with different chain lengths are used to estimate the excess free energy of lipid-protein interaction that arises from hydrophobic mismatch. For a wide range of integral proteins and peptides, the energy cost is much less than the elastic penalty of fully stretching or compressing the lipid chains to achieve complete hydrophobic matching. The chain length dependences of the free energies of lipid association are described by a model that combines elastic chain extension with a free energy term that depends linearly on the extent of residual mismatch. The excess free energy densities involved lie in the region of 0.5-2.0 k(B)T x nm(-2). Values of this size could arise from exposure of hydrophobic groups to polar portions of the lipid or protein, but not directly to water, or alternatively from changes in tilt of the transmembrane helices that are energetically comparable to those activating mechanosensitive channels. The influence of hydrophobic mismatch on dimerization of transmembrane helices and their transfer between lipid vesicles, and on shifts in chain-melting transitions of lipid bilayers by incorporated proteins, is analyzed by using the same thermodynamic model. Segmental order parameters confirm that elastic lipid chain distortions are insufficient to compensate fully for the mismatch, but the dependence on chain length with tryptophan-anchored peptides requires that the free energy density of hydrophobic mismatch should increase with increasing extent of mismatch.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18234817      PMCID: PMC2367201          DOI: 10.1529/biophysj.107.121475

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  80 in total

Review 1.  Protein compressibility, dynamics, and pressure.

Authors:  D P Kharakoz
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

2.  Polarity and permeation profiles in lipid membranes.

Authors:  D Marsh
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

Review 3.  Advances in determination of a high-resolution three-dimensional structure of rhodopsin, a model of G-protein-coupled receptors (GPCRs).

Authors:  D C Teller; T Okada; C A Behnke; K Palczewski; R E Stenkamp
Journal:  Biochemistry       Date:  2001-07-03       Impact factor: 3.162

4.  Selectivity in lipid binding to the bacterial outer membrane protein OmpF.

Authors:  A H O'Keeffe; J M East; A G Lee
Journal:  Biophys J       Date:  2000-10       Impact factor: 4.033

5.  Effects of aromatic residues at the ends of transmembrane alpha-helices on helix interactions with lipid bilayers.

Authors:  S Mall; R Broadbridge; R P Sharma; A G Lee; J M East
Journal:  Biochemistry       Date:  2000-02-29       Impact factor: 3.162

6.  Sensitivity of single membrane-spanning alpha-helical peptides to hydrophobic mismatch with a lipid bilayer: effects on backbone structure, orientation, and extent of membrane incorporation.

Authors:  M R de Planque; E Goormaghtigh; D V Greathouse; R E Koeppe ; J A Kruijtzer; R M Liskamp; B de Kruijff; J A Killian
Journal:  Biochemistry       Date:  2001-04-24       Impact factor: 3.162

7.  Modulation of Na,K-ATPase and Na-ATPase activity by phospholipids and cholesterol. I. Steady-state kinetics.

Authors:  F Cornelius
Journal:  Biochemistry       Date:  2001-07-31       Impact factor: 3.162

8.  Self-association of model transmembrane alpha-helices is modulated by lipid structure.

Authors:  S Mall; R Broadbridge; R P Sharma; J M East; A G Lee
Journal:  Biochemistry       Date:  2001-10-16       Impact factor: 3.162

9.  Effect of chain length and unsaturation on elasticity of lipid bilayers.

Authors:  W Rawicz; K C Olbrich; T McIntosh; D Needham; E Evans
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

10.  Consequences of hydrophobic mismatch between lipids and melibiose permease on melibiose transport.

Authors:  F Dumas; J F Tocanne; G Leblanc; M C Lebrun
Journal:  Biochemistry       Date:  2000-04-25       Impact factor: 3.162

View more
  45 in total

1.  Quantitative modeling of membrane deformations by multihelical membrane proteins: application to G-protein coupled receptors.

Authors:  Sayan Mondal; George Khelashvili; Jufang Shan; Olaf S Andersen; Harel Weinstein
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

2.  Orientation and conformation of lipids in crystals of transmembrane proteins.

Authors:  Derek Marsh; Tibor Páli
Journal:  Eur Biophys J       Date:  2012-05-30       Impact factor: 1.733

Review 3.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

4.  Structural biology: Highly charged meetings.

Authors:  Anthony G Lee
Journal:  Nature       Date:  2009-11-26       Impact factor: 49.962

5.  Membrane thickness varies around the circumference of the transmembrane protein BtuB.

Authors:  Jeffrey F Ellena; Pawel Lackowicz; Hillary Mongomery; David S Cafiso
Journal:  Biophys J       Date:  2011-03-02       Impact factor: 4.033

6.  Protein shape change has a major effect on the gating energy of a mechanosensitive channel.

Authors:  O H Samuli Ollila; Martti Louhivuori; Siewert J Marrink; Ilpo Vattulainen
Journal:  Biophys J       Date:  2011-04-06       Impact factor: 4.033

7.  Interaction of the Mechanosensitive Channel, MscS, with the Membrane Bilayer through Lipid Intercalation into Grooves and Pockets.

Authors:  Tim Rasmussen; Akiko Rasmussen; Limin Yang; Corinna Kaul; Susan Black; Heloisa Galbiati; Stuart J Conway; Samantha Miller; Paul Blount; Ian Rylance Booth
Journal:  J Mol Biol       Date:  2019-06-04       Impact factor: 5.469

8.  Synergistic insertion of antimicrobial magainin-family peptides in membranes depends on the lipid spontaneous curvature.

Authors:  Erik Strandberg; Jonathan Zerweck; Parvesh Wadhwani; Anne S Ulrich
Journal:  Biophys J       Date:  2013-03-19       Impact factor: 4.033

9.  Intramembrane water associated with TOAC spin-labeled alamethicin: electron spin-echo envelope modulation by D2O.

Authors:  R Bartucci; R Guzzi; L Sportelli; D Marsh
Journal:  Biophys J       Date:  2009-02       Impact factor: 4.033

10.  Principles of membrane protein interactions with annular lipids deduced from aquaporin-0 2D crystals.

Authors:  Richard K Hite; Zongli Li; Thomas Walz
Journal:  EMBO J       Date:  2010-04-13       Impact factor: 11.598

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.