Literature DB >> 18233415

Relaxation of stretched DNA in slitlike confinement.

A Balducci1, C-C Hsieh, P S Doyle.   

Abstract

We experimentally observe two separate time scales governing the entropic recoil in the linear force-extension regime of single double-stranded DNA in slit confinement. We demonstrate the existence of two distinct relaxation regimes at different extensions during relaxation. Contrary to bulk measurements, the true longest relaxation time may only be probed very close to equilibrium. A simple model of the relaxation mechanism leads to a scaling analysis that correctly predicts the extension at the crossover between the two regimes.

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Year:  2007        PMID: 18233415     DOI: 10.1103/PhysRevLett.99.238102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  11 in total

1.  Modeling the relaxation time of DNA confined in a nanochannel.

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Journal:  Biomicrofluidics       Date:  2013-10-22       Impact factor: 2.800

Review 2.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

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Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

3.  Electrophoretic mobilities of counterions and a polymer in cylindrical pores.

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Journal:  J Chem Phys       Date:  2014-09-21       Impact factor: 3.488

4.  Simulations of DNA stretching by flow field in microchannels with complex geometry.

Authors:  Chiou-De Huang; Dun-Yen Kang; Chih-Chen Hsieh
Journal:  Biomicrofluidics       Date:  2014-02-07       Impact factor: 2.800

5.  Electrokinetically-driven transport of DNA through focused ion beam milled nanofluidic channels.

Authors:  Laurent D Menard; J Michael Ramsey
Journal:  Anal Chem       Date:  2012-12-24       Impact factor: 6.986

6.  Coil-stretch Transition of DNA Molecules in Slit-like Confinement.

Authors:  Jing Tang; Daniel W Trahan; Patrick S Doyle
Journal:  Macromolecules       Date:  2010-03-23       Impact factor: 5.985

7.  Direct observation of single flexible polymers using single stranded DNA().

Authors:  Christopher Brockman; Sun Ju Kim; Charles M Schroeder
Journal:  Soft Matter       Date:  2011-06-02       Impact factor: 3.679

8.  A device for performing lateral conductance measurements on individual double-stranded DNA molecules.

Authors:  Laurent D Menard; Chad E Mair; Michael E Woodson; Jean Pierre Alarie; J Michael Ramsey
Journal:  ACS Nano       Date:  2012-09-17       Impact factor: 15.881

9.  Microfluidic systems for single DNA dynamics.

Authors:  Danielle J Mai; Christopher Brockman; Charles M Schroeder
Journal:  Soft Matter       Date:  2012-07-03       Impact factor: 3.679

10.  Single DNA molecule jamming and history-dependent dynamics during motor-driven viral packaging.

Authors:  Nicholas Keller; Shelley Grimes; Paul J Jardine; Douglas E Smith
Journal:  Nat Phys       Date:  2016-05-02       Impact factor: 20.034

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