Literature DB >> 18233336

Spontaneous emergence of modularity in a model of evolving individuals.

Jun Sun1, Michael W Deem.   

Abstract

We investigate the selective forces that promote the emergence of modularity in nature. We demonstrate the spontaneous emergence of modularity in a population of individuals that evolve in a changing environment. We show that the level of modularity correlates with the rapidity and severity of environmental change. The modularity arises as a synergistic response to the noise in the environment in the presence of horizontal gene transfer. We suggest that the hierarchical structure observed in the natural world may be a broken-symmetry state, which generically results from evolution in a changing environment.

Mesh:

Year:  2007        PMID: 18233336     DOI: 10.1103/PhysRevLett.99.228107

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  28 in total

1.  Fitness in time-dependent environments includes a geometric phase contribution.

Authors:  Sorin Tanase-Nicola; Ilya Nemenman
Journal:  J R Soc Interface       Date:  2011-11-23       Impact factor: 4.118

2.  A multi-scale model for correlation in B cell VDJ usage of zebrafish.

Authors:  Keyao Pan; Michael W Deem
Journal:  Phys Biol       Date:  2011-08-10       Impact factor: 2.583

Review 3.  Scaffold translation: barriers between concept and clinic.

Authors:  Scott J Hollister; William L Murphy
Journal:  Tissue Eng Part B Rev       Date:  2011-09-21       Impact factor: 6.389

4.  You cannot tell a book by looking at the cover: Cryptic complexity in bacterial evolution.

Authors:  Qiucen Zhang; Julia Bos; Grigory Tarnopolskiy; James C Sturm; Hyunsung Kim; Nader Pourmand; Robert H Austin
Journal:  Biomicrofluidics       Date:  2014-09-09       Impact factor: 2.800

5.  Modular knowledge systems accelerate human migration in asymmetric random environments.

Authors:  Dong Wang; Michael W Deem
Journal:  J R Soc Interface       Date:  2016-12       Impact factor: 4.118

6.  Modularity enhances the rate of evolution in a rugged fitness landscape.

Authors:  Jeong-Man Park; Man Chen; Dong Wang; Michael W Deem
Journal:  Phys Biol       Date:  2015-03-19       Impact factor: 2.583

7.  Quasispecies theory for finite populations.

Authors:  Jeong-Man Park; Enrique Muñoz; Michael W Deem
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-01-06

Review 8.  Theoretical aspects of immunity.

Authors:  Michael W Deem; Pooya Hejazi
Journal:  Annu Rev Chem Biomol Eng       Date:  2010       Impact factor: 11.059

9.  Hierarchy of gene expression data is predictive of future breast cancer outcome.

Authors:  Man Chen; Michael W Deem
Journal:  Phys Biol       Date:  2013-10-03       Impact factor: 2.583

10.  Extinctions in heterogeneous environments and the evolution of modularity.

Authors:  Nadav Kashtan; Merav Parter; Erez Dekel; Avi E Mayo; Uri Alon
Journal:  Evolution       Date:  2009-03-10       Impact factor: 3.694

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