Literature DB >> 18232822

DNA bending stiffness on small length scales.

Chongli Yuan1, Huimin Chen, Xiong Wen Lou, Lynden A Archer.   

Abstract

Bending properties of short (15-90 bp), double-stranded DNA fragments are quantified using fluorescence resonance energy transfer and small angle x-ray scattering. Results from both types of measurements indicate that short double-stranded DNA fragments exhibit surprisingly high flexibility. These observations are discussed in terms of base-pair-level length fluctuations originating from dynamic features of Watson-Crick base pairs.

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Year:  2008        PMID: 18232822     DOI: 10.1103/PhysRevLett.100.018102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  19 in total

1.  Single-molecule spectroscopic study of dynamic nanoscale DNA bending behavior of HIV-1 nucleocapsid protein.

Authors:  Hui Wang; Karin Musier-Forsyth; Caroline Falk; Paul F Barbara
Journal:  J Phys Chem B       Date:  2012-05-16       Impact factor: 2.991

2.  Polymorphism of DNA conformation inside the bacteriophage capsid.

Authors:  Amélie Leforestier
Journal:  J Biol Phys       Date:  2013-04-12       Impact factor: 1.365

3.  Elasticity of DNA and the effect of dendrimer binding.

Authors:  Santosh Mogurampelly; Bidisha Nandy; Roland R Netz; Prabal K Maiti
Journal:  Eur Phys J E Soft Matter       Date:  2013-06-28       Impact factor: 1.890

4.  Probing the conformational distributions of subpersistence length DNA.

Authors:  Alexander J Mastroianni; David A Sivak; Phillip L Geissler; A Paul Alivisatos
Journal:  Biophys J       Date:  2009-09-02       Impact factor: 4.033

5.  Atomic force microscopy study of DNA flexibility on short length scales: smooth bending versus kinking.

Authors:  Alexey K Mazur; Mounir Maaloum
Journal:  Nucleic Acids Res       Date:  2014-11-20       Impact factor: 16.971

6.  Stretching and bending fluctuations of short DNA molecules.

Authors:  Ranjith Padinhateeri; Gautam I Menon
Journal:  Biophys J       Date:  2013-01-22       Impact factor: 4.033

7.  Measuring shape-dependent looping probability of DNA.

Authors:  Tung T Le; Harold D Kim
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

8.  Electrophoretic Mobility of DNA in Solutions of High Ionic Strength.

Authors:  Earle Stellwagen; Nancy C Stellwagen
Journal:  Biophys J       Date:  2020-04-30       Impact factor: 4.033

9.  The flexibility of locally melted DNA.

Authors:  Robert A Forties; Ralf Bundschuh; Michael G Poirier
Journal:  Nucleic Acids Res       Date:  2009-05-31       Impact factor: 16.971

10.  Local and global effects of strong DNA bending induced during molecular dynamics simulations.

Authors:  Jeremy Curuksu; Martin Zacharias; Richard Lavery; Krystyna Zakrzewska
Journal:  Nucleic Acids Res       Date:  2009-04-20       Impact factor: 16.971

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