Literature DB >> 18227150

Nap1 links transcription elongation, chromatin assembly, and messenger RNP complex biogenesis.

Brian C Del Rosario1, Lucy F Pemberton.   

Abstract

Chromatin remodeling is central to the regulation of transcription elongation. We demonstrate that the conserved Saccharomyces cerevisiae histone chaperone Nap1 associates with chromatin. We show that Nap1 regulates transcription of PHO5, and the increase in transcript level and the higher phosphatase activity plateau observed for Deltanap1 cells suggest that the net function of Nap1 is to facilitate nucleosome reassembly during transcription elongation. To further our understanding of histone chaperones in transcription elongation, we identified factors that regulate the function of Nap1 in this process. One factor investigated is an essential mRNA export and TREX complex component, Yra1. Nap1 interacts directly with Yra1 and genetically with other TREX complex components and the mRNA export factor Mex67. Additionally, we show that the recruitment of Nap1 to the coding region of actively transcribed genes is Yra1 dependent and that its recruitment to promoters is TREX complex independent. These observations suggest that Nap1 functions provide a new connection between transcription elongation, chromatin assembly, and messenger RNP complex biogenesis.

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Year:  2008        PMID: 18227150      PMCID: PMC2268417          DOI: 10.1128/MCB.02136-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  56 in total

1.  Yra1p, a conserved nuclear RNA-binding protein, interacts directly with Mex67p and is required for mRNA export.

Authors:  K Strässer; E Hurt
Journal:  EMBO J       Date:  2000-02-01       Impact factor: 11.598

2.  Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription.

Authors:  P Komarnitsky; E J Cho; S Buratowski
Journal:  Genes Dev       Date:  2000-10-01       Impact factor: 11.361

Review 3.  The role of chromatin during transcription.

Authors:  Bing Li; Michael Carey; Jerry L Workman
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 4.  Nap1: taking a closer look at a juggler protein of extraordinary skills.

Authors:  Jordanka Zlatanova; Corrine Seebart; Miroslav Tomschik
Journal:  FASEB J       Date:  2007-02-22       Impact factor: 5.191

5.  A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae.

Authors:  S Chávez; T Beilharz; A G Rondón; H Erdjument-Bromage; P Tempst; J Q Svejstrup; T Lithgow; A Aguilera
Journal:  EMBO J       Date:  2000-11-01       Impact factor: 11.598

6.  Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map.

Authors:  Sean R Collins; Kyle M Miller; Nancy L Maas; Assen Roguev; Jeffrey Fillingham; Clement S Chu; Maya Schuldiner; Marinella Gebbia; Judith Recht; Michael Shales; Huiming Ding; Hong Xu; Junhong Han; Kristin Ingvarsdottir; Benjamin Cheng; Brenda Andrews; Charles Boone; Shelley L Berger; Phil Hieter; Zhiguo Zhang; Grant W Brown; C James Ingles; Andrew Emili; C David Allis; David P Toczyski; Jonathan S Weissman; Jack F Greenblatt; Nevan J Krogan
Journal:  Nature       Date:  2007-02-21       Impact factor: 49.962

7.  A genome-wide role for CHD remodelling factors and Nap1 in nucleosome disassembly.

Authors:  Julian Walfridsson; Olga Khorosjutina; Paulina Matikainen; Claes M Gustafsson; Karl Ekwall
Journal:  EMBO J       Date:  2007-05-17       Impact factor: 11.598

8.  Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Authors:  Nevan J Krogan; Gerard Cagney; Haiyuan Yu; Gouqing Zhong; Xinghua Guo; Alexandr Ignatchenko; Joyce Li; Shuye Pu; Nira Datta; Aaron P Tikuisis; Thanuja Punna; José M Peregrín-Alvarez; Michael Shales; Xin Zhang; Michael Davey; Mark D Robinson; Alberto Paccanaro; James E Bray; Anthony Sheung; Bryan Beattie; Dawn P Richards; Veronica Canadien; Atanas Lalev; Frank Mena; Peter Wong; Andrei Starostine; Myra M Canete; James Vlasblom; Samuel Wu; Chris Orsi; Sean R Collins; Shamanta Chandran; Robin Haw; Jennifer J Rilstone; Kiran Gandi; Natalie J Thompson; Gabe Musso; Peter St Onge; Shaun Ghanny; Mandy H Y Lam; Gareth Butland; Amin M Altaf-Ul; Shigehiko Kanaya; Ali Shilatifard; Erin O'Shea; Jonathan S Weissman; C James Ingles; Timothy R Hughes; John Parkinson; Mark Gerstein; Shoshana J Wodak; Andrew Emili; Jack F Greenblatt
Journal:  Nature       Date:  2006-03-22       Impact factor: 49.962

9.  Checkpoint proteins control morphogenetic events during DNA replication stress in Saccharomyces cerevisiae.

Authors:  Jorrit M Enserink; Marcus B Smolka; Huilin Zhou; Richard D Kolodner
Journal:  J Cell Biol       Date:  2006-11-27       Impact factor: 10.539

10.  A new connection of mRNP biogenesis and export with transcription-coupled repair.

Authors:  Hélène Gaillard; Ralf Erik Wellinger; Andrés Aguilera
Journal:  Nucleic Acids Res       Date:  2007-05-30       Impact factor: 16.971

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  15 in total

1.  In vitro reconstitution of PHO5 promoter chromatin remodeling points to a role for activator-nucleosome competition in vivo.

Authors:  Franziska Ertel; A Barbara Dirac-Svejstrup; Christina Bech Hertel; Dorothea Blaschke; Jesper Q Svejstrup; Philipp Korber
Journal:  Mol Cell Biol       Date:  2010-06-21       Impact factor: 4.272

2.  Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro.

Authors:  Benjamin G Kuryan; Jessica Kim; Nancy Nga H Tran; Sarah R Lombardo; Swaminathan Venkatesh; Jerry L Workman; Michael Carey
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-23       Impact factor: 11.205

3.  Histone chaperones, histone acetylation, and the fluidity of the chromogenome.

Authors:  Jeffrey C Hansen; Jennifer K Nyborg; Karolin Luger; Laurie A Stargell
Journal:  J Cell Physiol       Date:  2010-08       Impact factor: 6.384

4.  Coordinated Action of Nap1 and RSC in Disassembly of Tandem Nucleosomes.

Authors:  Rashmi Prasad; Sheena D'Arcy; Arjan Hada; Karolin Luger; Blaine Bartholomew
Journal:  Mol Cell Biol       Date:  2016-08-12       Impact factor: 4.272

Review 5.  Overcoming the nucleosome barrier during transcript elongation.

Authors:  Steven J Petesch; John T Lis
Journal:  Trends Genet       Date:  2012-03-31       Impact factor: 11.639

6.  Interaction with the histone chaperone Vps75 promotes nuclear localization and HAT activity of Rtt109 in vivo.

Authors:  Kristin M Keck; Lucy F Pemberton
Journal:  Traffic       Date:  2011-05-05       Impact factor: 6.215

7.  The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation.

Authors:  Sunnie M Yoh; Joseph S Lucas; Katherine A Jones
Journal:  Genes Dev       Date:  2008-12-15       Impact factor: 11.361

8.  Nap1 and Chz1 have separate Htz1 nuclear import and assembly functions.

Authors:  Korinna Straube; Jeffrey S Blackwell; Lucy F Pemberton
Journal:  Traffic       Date:  2009-11-19       Impact factor: 6.215

9.  Histone chaperones Nap1 and Vps75 regulate histone acetylation during transcription elongation.

Authors:  Yu-Ming Xue; Anna K Kowalska; Kamila Grabowska; Katarzyna Przybyt; Magda A Cichewicz; Brian C Del Rosario; Lucy F Pemberton
Journal:  Mol Cell Biol       Date:  2013-02-11       Impact factor: 4.272

10.  Histone Chaperone Nap1 Is a Major Regulator of Histone H2A-H2B Dynamics at the Inducible GAL Locus.

Authors:  Xu Chen; Sheena D'Arcy; Catherine A Radebaugh; Daniel D Krzizike; Holli A Giebler; Liangquan Huang; Jennifer K Nyborg; Karolin Luger; Laurie A Stargell
Journal:  Mol Cell Biol       Date:  2016-03-31       Impact factor: 4.272

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