Literature DB >> 18223256

Single-stranded DNA-binding protein recruits DNA polymerase V to primer termini on RecA-coated DNA.

Gali Arad1, Ayal Hendel, Claus Urbanke, Ute Curth, Zvi Livneh.   

Abstract

Translesion DNA synthesis (TLS) by DNA polymerase V (polV) in Escherichia coli involves accessory proteins, including RecA and single-stranded DNA-binding protein (SSB). To elucidate the role of SSB in TLS we used an in vitro exonuclease protection assay and found that SSB increases the accessibility of 3' primer termini located at abasic sites in RecA-coated gapped DNA. The mutant SSB-113 protein, which is defective in protein-protein interactions, but not in DNA binding, was as effective as wild-type SSB in increasing primer termini accessibility, but deficient in supporting polV-catalyzed TLS. Consistently, the heterologous SSB proteins gp32, encoded by phage T4, and ICP8, encoded by herpes simplex virus 1, could replace E. coli SSB in the TLS reaction, albeit with lower efficiency. Immunoprecipitation experiments indicated that polV directly interacts with SSB and that this interaction is disrupted by the SSB-113 mutation. Taken together our results suggest that SSB functions to recruit polV to primer termini on RecA-coated DNA, operating by two mechanisms: 1) increasing the accessibility of 3' primer termini caused by binding of SSB to DNA and 2) a direct SSB-polV interaction mediated by the C terminus of SSB.

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Year:  2008        PMID: 18223256     DOI: 10.1074/jbc.M710290200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  21 in total

Review 1.  Essential biological processes of an emerging pathogen: DNA replication, transcription, and cell division in Acinetobacter spp.

Authors:  Andrew Robinson; Anthony J Brzoska; Kylie M Turner; Ryan Withers; Elizabeth J Harry; Peter J Lewis; Nicholas E Dixon
Journal:  Microbiol Mol Biol Rev       Date:  2010-06       Impact factor: 11.056

2.  A mechanism for single-stranded DNA-binding protein (SSB) displacement from single-stranded DNA upon SSB-RecO interaction.

Authors:  Jin Inoue; Takayuki Nagae; Masaki Mishima; Yutaka Ito; Takehiko Shibata; Tsutomu Mikawa
Journal:  J Biol Chem       Date:  2010-12-17       Impact factor: 5.157

3.  Allosteric effects of SSB C-terminal tail on assembly of E. coli RecOR proteins.

Authors:  Min Kyung Shinn; Alexander G Kozlov; Timothy M Lohman
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

4.  Multiple C-terminal tails within a single E. coli SSB homotetramer coordinate DNA replication and repair.

Authors:  Edwin Antony; Elizabeth Weiland; Quan Yuan; Carol M Manhart; Binh Nguyen; Alexander G Kozlov; Charles S McHenry; Timothy M Lohman
Journal:  J Mol Biol       Date:  2013-09-07       Impact factor: 5.469

Review 5.  SSB as an organizer/mobilizer of genome maintenance complexes.

Authors:  Robert D Shereda; Alexander G Kozlov; Timothy M Lohman; Michael M Cox; James L Keck
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 Sep-Oct       Impact factor: 8.250

6.  Escherichia coli AlkB interacts with single-stranded DNA binding protein SSB by an intrinsically disordered region of SSB.

Authors:  Richa Nigam; Monisha Mohan; Gururaj Shivange; Pranjal Kumar Dewangan; Roy Anindya
Journal:  Mol Biol Rep       Date:  2018-07-04       Impact factor: 2.316

7.  Simple and efficient purification of Escherichia coli DNA polymerase V: cofactor requirements for optimal activity and processivity in vitro.

Authors:  Kiyonobu Karata; Alexandra Vaisman; Myron F Goodman; Roger Woodgate
Journal:  DNA Repair (Amst)       Date:  2012-02-15

8.  Stimulation of Escherichia coli DNA damage inducible DNA helicase DinG by the single-stranded DNA binding protein SSB.

Authors:  Zishuo Cheng; Aimee Caillet; Binbin Ren; Huangen Ding
Journal:  FEBS Lett       Date:  2012-10-01       Impact factor: 4.124

9.  The recombination mediator proteins RecFOR maintain RecA* levels for maximal DNA polymerase V Mut activity.

Authors:  Paromita Raychaudhury; Kenneth J Marians
Journal:  J Biol Chem       Date:  2018-11-27       Impact factor: 5.157

10.  The Roles of UmuD in Regulating Mutagenesis.

Authors:  Jaylene N Ollivierre; Jing Fang; Penny J Beuning
Journal:  J Nucleic Acids       Date:  2010-09-30
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