Literature DB >> 18218650

Improving yeast two-hybrid screening systems.

Manfred Koegl1, Peter Uetz.   

Abstract

Yeast two-hybrid (Y2H) screening methods are an effective means for the detection of protein-protein interactions. Optimisation and automation has increased the throughput of the method to an extent that allows the systematic mapping of protein-protein interactions on a proteome-wide scale. Since two-hybrid screens fail to detect a great number of interactions, parallel high-throughput approaches are needed for proteome-wide interaction screens. In this review, we discuss and compare different approaches for adaptation of Y2H screening to high-throughput, the limits of the method and possible alternative approaches to complement the mapping of organism-wide protein-protein interactions.

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Year:  2008        PMID: 18218650     DOI: 10.1093/bfgp/elm035

Source DB:  PubMed          Journal:  Brief Funct Genomic Proteomic        ISSN: 1473-9550


  29 in total

Review 1.  Tools used to study how protein complexes are assembled in signaling cascades.

Authors:  Susan Dwane; Patrick A Kiely
Journal:  Bioeng Bugs       Date:  2011-09-01

Review 2.  Diversity in genetic in vivo methods for protein-protein interaction studies: from the yeast two-hybrid system to the mammalian split-luciferase system.

Authors:  Bram Stynen; Hélène Tournu; Jan Tavernier; Patrick Van Dijck
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

3.  High throughput flow cytometry based yeast two-hybrid array approach for large-scale analysis of protein-protein interactions.

Authors:  Jun Chen; Mark B Carter; Bruce S Edwards; Hong Cai; Larry A Sklar
Journal:  Cytometry A       Date:  2011-09-27       Impact factor: 4.355

4.  Novel multiprotein complexes identified in the hyperthermophilic archaeon Pyrococcus furiosus by non-denaturing fractionation of the native proteome.

Authors:  Angeli Lal Menon; Farris L Poole; Aleksandar Cvetkovic; Sunia A Trauger; Ewa Kalisiak; Joseph W Scott; Saratchandra Shanmukh; Jeremy Praissman; Francis E Jenney; William R Wikoff; John V Apon; Gary Siuzdak; Michael W W Adams
Journal:  Mol Cell Proteomics       Date:  2008-11-28       Impact factor: 5.911

5.  A yeast-based screen reveals that sulfasalazine inhibits tetrahydrobiopterin biosynthesis.

Authors:  Christopher Chidley; Hirohito Haruki; Miriam Grønlund Pedersen; Evelyne Muller; Kai Johnsson
Journal:  Nat Chem Biol       Date:  2011-04-17       Impact factor: 15.040

6.  Automated protein-DNA interaction screening of Drosophila regulatory elements.

Authors:  Korneel Hens; Jean-Daniel Feuz; Alina Isakova; Antonina Iagovitina; Andreas Massouras; Julien Bryois; Patrick Callaerts; Susan E Celniker; Bart Deplancke
Journal:  Nat Methods       Date:  2011-10-30       Impact factor: 28.547

Review 7.  Peptide aptamers: development and applications.

Authors:  Sergey Reverdatto; David S Burz; Alexander Shekhtman
Journal:  Curr Top Med Chem       Date:  2015       Impact factor: 3.295

8.  In vivo approaches to dissecting the function of RNA helicases in eukaryotic ribosome assembly.

Authors:  David C Rawling; Susan J Baserga
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

9.  WebPrInSeS: automated full-length clone sequence identification and verification using high-throughput sequencing data.

Authors:  Andreas Massouras; Frederik Decouttere; Korneel Hens; Bart Deplancke
Journal:  Nucleic Acids Res       Date:  2010-05-25       Impact factor: 16.971

10.  Identification of novel putative-binding proteins for cellular prion protein and a specific interaction with the STIP1 homology and U-Box-containing protein 1.

Authors:  Ana Paula Lappas Gimenez; Larissa Morato Luciani Richter; Mariana Campos Atherino; Breno Castello Branco Beirão; Celso Fávaro; Michele Dietrich Moura Costa; Silvio Marques Zanata; Bettina Malnic; Adriana Frohlich Mercadante
Journal:  Prion       Date:  2015-08-03       Impact factor: 3.931

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