Literature DB >> 18214469

The pva operon is located on the megaplasmid of Sphingopyxis sp. strain 113P3 and is constitutively expressed, although expression is enhanced by PVA.

Xiaoping Hu1, Rie Mamoto, Yoshio Fujioka, Akio Tani, Kazuhide Kimbara, Fusako Kawai.   

Abstract

The upstream and downstream regions of the tentative pva operon including genes encoding oxidized polyvinyl alcohol (PVA) hydrolase (oph), PVA dehydrogenase (pvaA) and cytochrome c (cytC) from Sphingopyxis sp. strain 113P3 were sequenced. The resultant 7.9 kb sequence contained orf1 in the upstream region and orf2 and orf3 in the downstream region. Reverse transcription-polymerase chain reaction (PCR) analyses revealed that the intergenic regions between orf1 and oph or between cytC and orf2 were expressed neither in PVA medium nor glucose medium, indicating that the pva operon consists of three genes. A transcription start site was determined by 5'-rapid amplification of cDNA ends to be 428 bp upstream of the start codon of the oph. The stop codon of cytC was followed by a sequence of inverted repeats that could function as a factor-independent transcription terminator. Strain 113P3 had one megaplasmid including the pva operon. Northern blot hybridization for the three genes revealed that mRNA size was approximately 3 to 4 kb and expression was elevated in PVA medium compared to glucose medium.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18214469     DOI: 10.1007/s00253-008-1348-y

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  4 in total

1.  Expression and fermentation optimization of oxidized polyvinyl alcohol hydrolase in E. coli.

Authors:  Yu Yang; Dongxu Zhang; Song Liu; Dongxu Jia; Guocheng Du; Jian Chen
Journal:  J Ind Microbiol Biotechnol       Date:  2011-06-22       Impact factor: 3.346

2.  Bioinformatics Analysis and Characterization of Highly Efficient Polyvinyl Alcohol (PVA)-Degrading Enzymes from the Novel PVA Degrader Stenotrophomonas rhizophila QL-P4.

Authors:  Yahong Wei; Jing Fu; Jianying Wu; Xinmiao Jia; Yunheng Zhou; Cuidan Li; Mengxing Dong; Shanshan Wang; Ju Zhang; Fei Chen
Journal:  Appl Environ Microbiol       Date:  2017-12-15       Impact factor: 4.792

3.  Complete Genome Sequence of Polyvinyl Alcohol-Degrading Strain Sphingopyxis sp. 113P3 (NBRC 111507).

Authors:  Yoshiyuki Ohtsubo; Yuji Nagata; Mitsuru Numata; Kieko Tsuchikane; Akira Hosoyama; Atsushi Yamazoe; Masataka Tsuda; Nobuyuki Fujita; Fusako Kawai
Journal:  Genome Announc       Date:  2015-10-15

4.  Understanding the metabolism of the tetralin degrader Sphingopyxis granuli strain TFA through genome-scale metabolic modelling.

Authors:  Inmaculada García-Romero; Juan Nogales; Eduardo Díaz; Eduardo Santero; Belén Floriano
Journal:  Sci Rep       Date:  2020-05-26       Impact factor: 4.379

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.