Literature DB >> 18210367

Population proteomics: investigation of protein diversity in human populations.

Dobrin Nedelkov1.   

Abstract

Outlined in this review is the concept of population proteomics, its aspects, enabling approaches, and significance in understanding proteins' roles in physiological processes and diseases. Population proteomics addresses the need for individual assessment of proteins across large populations to delineate the existence of structural variations, determine their frequency, and explore the association of the modifications with specific diseases. Besides the basic concepts and underlying reasons for such protein diversity studies, also reviewed here are the results of two fundamental studies that investigated human plasma protein diversity across the healthy population in the United States. Such studies of protein diversity are needed to map all the post-expression protein modifications and determine the wild-type protein profiles, similar to the human diversity studies at the genome level that have helped redefine the "normal" human genome.

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Year:  2008        PMID: 18210367     DOI: 10.1002/pmic.200700501

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  16 in total

1.  Mass spectrometric immunoassay for quantitative determination of transthyretin and its variants.

Authors:  Olgica Trenchevska; Elena Kamcheva; Dobrin Nedelkov
Journal:  Proteomics       Date:  2011-08-09       Impact factor: 3.984

2.  Efficient sample preparation in immuno-matrix-assisted laser desorption/ionization mass spectrometry using acoustic trapping.

Authors:  Björn Hammarström; Hong Yan; Johan Nilsson; Simon Ekström
Journal:  Biomicrofluidics       Date:  2013-03-28       Impact factor: 2.800

3.  Mass spectrometric immunoassay of intact insulin and related variants for population proteomics studies.

Authors:  Paul E Oran; Jason W Jarvis; Chad R Borges; Nisha D Sherma; Randall W Nelson
Journal:  Proteomics Clin Appl       Date:  2011-06-08       Impact factor: 3.494

4.  Identification of single amino acid polymorphisms in MS/MS spectra of peptides.

Authors:  A L Chernobrovkin; V A Mitkevich; I A Popov; M I Indeikina; E V Ilgisonis; A V Lisitsa; A I Archakov
Journal:  Dokl Biochem Biophys       Date:  2011-05-18       Impact factor: 0.788

5.  Novel serum biomarkers for erythropoietin use in humans: a proteomic approach.

Authors:  Britt Christensen; Lucila Sackmann-Sala; Diana Cruz-Topete; Jens Otto L Jørgensen; Niels Jessen; Carsten Lundby; John J Kopchick
Journal:  J Appl Physiol (1985)       Date:  2010-10-21

6.  Rapid development of sensitive, high-throughput, quantitative and highly selective mass spectrometric targeted immunoassays for clinically important proteins in human plasma and serum.

Authors:  Bryan Krastins; Amol Prakash; David A Sarracino; Dobrin Nedelkov; Eric E Niederkofler; Urban A Kiernan; Randall Nelson; Maryann S Vogelsang; Gouri Vadali; Alejandra Garces; Jennifer N Sutton; Scott Peterman; Gregory Byram; Bruno Darbouret; Joëlle R Pérusse; Nabil G Seidah; Benoit Coulombe; Johan Gobom; Erik Portelius; Josef Pannee; Kaj Blennow; Vathany Kulasingam; Lewis Couchman; Caje Moniz; Mary F Lopez
Journal:  Clin Biochem       Date:  2013-01-08       Impact factor: 3.281

7.  Glycosylation status of vitamin D binding protein in cancer patients.

Authors:  Douglas S Rehder; Randall W Nelson; Chad R Borges
Journal:  Protein Sci       Date:  2009-10       Impact factor: 6.725

Review 8.  Mass spectrometric immunoassay and MRM as targeted MS-based quantitative approaches in biomarker development: potential applications to cardiovascular disease and diabetes.

Authors:  Hussein Yassine; Chad R Borges; Matthew R Schaab; Dean Billheimer; Craig Stump; Peter Reaven; Serrine S Lau; Randall Nelson
Journal:  Proteomics Clin Appl       Date:  2013-07-09       Impact factor: 3.494

9.  Quantification of protein isoforms in mesenchymal stem cells by reductive dimethylation of lysines in intact proteins.

Authors:  Yi-Min She; Michael Rosu-Myles; Lisa Walrond; Terry D Cyr
Journal:  Proteomics       Date:  2012-01-13       Impact factor: 3.984

10.  Human OMICs and Computational Biology Research in Africa: Current Challenges and Prospects.

Authors:  Yosr Hamdi; Lyndon Zass; Houcemeddine Othman; Fouzia Radouani; Imane Allali; Mariem Hanachi; Chiamaka Jessica Okeke; Melek Chaouch; Maureen Bilinga Tendwa; Chaimae Samtal; Reem Mohamed Sallam; Nihad Alsayed; Michael Turkson; Samah Ahmed; Alia Benkahla; Lilia Romdhane; Oussema Souiai; Özlem Tastan Bishop; Kais Ghedira; Faisal Mohamed Fadlelmola; Nicola Mulder; Samar Kamal Kassim
Journal:  OMICS       Date:  2021-04-01
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