Literature DB >> 18205524

Implicit-solvent mesoscale model based on soft-core potentials for self-assembled lipid membranes.

Joel D Revalee1, Mohamed Laradji, P B Sunil Kumar.   

Abstract

An efficient implicit-solvent model for self-assembled lipid bilayers is presented and analyzed using Langevin molecular dynamics simulations. The model is based on soft interactions between particles and short-range attractive interaction between lipid tails, leading for the self-assembly of a lipid bilayer without an explicit solvent. This allows for efficient simulations of large membranes over long times. The model exhibits a fluid phase at high temperatures and a gel phase at low temperatures, identified with the Lbeta-phase. The melting transition is investigated via analysis of the diffusivity of the lipid molecules, the chain-orientational order parameter, the sixfold bond-orientational order parameter, and the positional and bond-orientational correlation functions. The analysis suggests the existence of a hexatic phase over a narrow range of temperatures around the melting transition. The elastic properties of the membrane in the fluid phase are also investigated.

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Year:  2008        PMID: 18205524     DOI: 10.1063/1.2825300

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

1.  Partial wrapping and spontaneous endocytosis of spherical nanoparticles by tensionless lipid membranes.

Authors:  Eric J Spangler; Sudhir Upreti; Mohamed Laradji
Journal:  J Chem Phys       Date:  2016-01-28       Impact factor: 3.488

2.  Combined effect of cortical cytoskeleton and transmembrane proteins on domain formation in biomembranes.

Authors:  Md Kabir Uddin Sikder; Kyle A Stone; P B Sunil Kumar; Mohamed Laradji
Journal:  J Chem Phys       Date:  2014-08-07       Impact factor: 3.488

3.  Stochastic model of self-assembly of cell-laden hydrogels.

Authors:  Zhenyu Shi; Nan Chen; Yanan Du; Ali Khademhosseini; Mark Alber
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-12-04

4.  Phase behavior of supported lipid bilayers: A systematic study by coarse-grained molecular dynamics simulations.

Authors:  Asma Poursoroush; Maria Maddalena Sperotto; Mohamed Laradji
Journal:  J Chem Phys       Date:  2017-04-21       Impact factor: 3.488

  4 in total

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