Literature DB >> 18202879

Aggregation of variables and system decomposition: Applications to fitness landscape analysis.

Max Shpak1, Peter Stadler, Gunter P Wagner, Joachim Hermisson.   

Abstract

In this paper we present general results on aggregation of variables, specifically as it applies to decomposable (partitionable) dynamical systems. We show that a particular class of transition matrices, namely, those satisfying an equitable partitioning property, are aggregable under appropriate decomposition operators. It is also shown that equitable partitions have a natural application to the description of mutation-selection matrices (fitness landscapes) when their fitness functions have certain symmetries concordant with the neighborhood relationships in the underlying configuration space. We propose that the aggregate variable descriptions of mutation-selection systems offer a potential formal definition of units of selection and evolution.

Year:  2004        PMID: 18202879     DOI: 10.1016/j.thbio.2004.02.001

Source DB:  PubMed          Journal:  Theory Biosci        ISSN: 1431-7613            Impact factor:   1.919


  6 in total

1.  Adaptive evolution on neutral networks.

Authors:  C O Wilke
Journal:  Bull Math Biol       Date:  2001-07       Impact factor: 1.758

2.  Mutation-selection balance: ancestry, load, and maximum principle.

Authors:  Joachim Hermisson; Oliver Redner; Holger Wagner; Ellen Baake
Journal:  Theor Popul Biol       Date:  2002-08       Impact factor: 1.570

3.  Error thresholds of replication in finite populations mutation frequencies and the onset of Muller's ratchet.

Authors:  M Nowak; P Schuster
Journal:  J Theor Biol       Date:  1989-04-20       Impact factor: 2.691

4.  A POPULATION GENETIC THEORY OF CANALIZATION.

Authors:  Günter P Wagner; Ginger Booth; Homayoun Bagheri-Chaichian
Journal:  Evolution       Date:  1997-04       Impact factor: 3.694

5.  Stationary mutant distributions and evolutionary optimization.

Authors:  P Schuster; J Swetina
Journal:  Bull Math Biol       Date:  1988       Impact factor: 1.758

6.  Some principles governing selection in self-reproducing macromolecular systems. An analog of Fisher's fundamental theorem.

Authors:  B L Jones
Journal:  J Math Biol       Date:  1978-07-27       Impact factor: 2.259

  6 in total
  2 in total

1.  Simon-Ando decomposability and fitness landscapes.

Authors:  Max Shpak; Peter Stadler; Gunter P Wagner; Lee Altenberg
Journal:  Theory Biosci       Date:  2004-09       Impact factor: 1.919

2.  The peaks and geometry of fitness landscapes.

Authors:  Kristina Crona; Devin Greene; Miriam Barlow
Journal:  J Theor Biol       Date:  2012-10-02       Impact factor: 2.691

  2 in total

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