Literature DB >> 11497165

Adaptive evolution on neutral networks.

C O Wilke1.   

Abstract

We study the evolution of large but finite asexual populations evolving in fitness landscapes in which all mutations are either neutral or strongly deleterious. We demonstrate that despite the absence of higher fitness genotypes, adaptation takes place as regions with more advantageous distributions of neutral genotypes are discovered. Since these discoveries are typically rare events, the population dynamics can be subdivided into separate epochs, with rapid transitions between them. Within one epoch, the average fitness in the population is approximately constant. The transitions between epochs, however, are generally accompanied by a significant increase in the average fitness. We verify our theoretical considerations with two analytically tractable bitstring models.

Mesh:

Year:  2001        PMID: 11497165     DOI: 10.1006/bulm.2001.0244

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN: 0092-8240            Impact factor:   1.758


  37 in total

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Authors:  Santiago F Elena; Rafael Sanjuán
Journal:  J Virol       Date:  2005-09       Impact factor: 5.103

Review 2.  Mechanisms of genetic robustness in RNA viruses.

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Journal:  EMBO Rep       Date:  2006-02       Impact factor: 8.807

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Journal:  J Mol Evol       Date:  2006-10-14       Impact factor: 2.395

4.  Evolution of coadaptation in a subdivided population.

Authors:  K Ryo Takahasi
Journal:  Genetics       Date:  2007-04-03       Impact factor: 4.562

5.  Exact solution of the Eigen model with general fitness functions and degradation rates.

Authors:  David B Saakian; Chin-Kun Hu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-20       Impact factor: 11.205

6.  Simon-Ando decomposability and fitness landscapes.

Authors:  Max Shpak; Peter Stadler; Gunter P Wagner; Lee Altenberg
Journal:  Theory Biosci       Date:  2004-09       Impact factor: 1.919

7.  Aggregation of variables and system decomposition: Applications to fitness landscape analysis.

Authors:  Max Shpak; Peter Stadler; Gunter P Wagner; Joachim Hermisson
Journal:  Theory Biosci       Date:  2004-06       Impact factor: 1.919

8.  A nonadaptive origin of a beneficial trait: in silico selection for free energy of folding leads to the neutral emergence of mutational robustness in single domain proteins.

Authors:  Rafael F Pagan; Steven E Massey
Journal:  J Mol Evol       Date:  2013-12-21       Impact factor: 2.395

9.  Experiments on the role of deleterious mutations as stepping stones in adaptive evolution.

Authors:  Arthur W Covert; Richard E Lenski; Claus O Wilke; Charles Ofria
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-05       Impact factor: 11.205

10.  A biophysical protein folding model accounts for most mutational fitness effects in viruses.

Authors:  C Scott Wylie; Eugene I Shakhnovich
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-24       Impact factor: 11.205

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