Literature DB >> 1820210

Analysis of bacteriophage T7 gene 10A and frameshifted 10B proteins.

J Sipley1, D Stassi, J Dunn, E Goldman.   

Abstract

Bacteriophage T7 capsid protein 10B has previously been proposed to arise by a translational frameshift near the 3' end of the capsid gene 10A coding sequence, adding an additional 53 amino acid residues to the carboxyl-terminal end of the protein. Here we show by peptide mapping experiments as well as by direct partial sequence analysis of an overlapping "junction" peptide, that 10B is in fact related to 10A by a -1 switch in reading frame in a narrow region near the carboxy terminus of 10A. Peptide mapping experiments demonstrate that 10A and 10B have the same amino terminus as well as virtually identical methionine-labeled peptide maps. However, the predicted unique carboxyl-terminal peptide from 10B was also identified. An overlapping peptide was isolated from 10B which spans the junction region in which the proposed translational frameshift is thought to occur. Partial sequencing of this junction peptide confirms a -1 frameshift within the last few codons of 10A.

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Year:  1991        PMID: 1820210      PMCID: PMC5952207     

Source DB:  PubMed          Journal:  Gene Expr        ISSN: 1052-2166


  7 in total

1.  Use of T7 RNA polymerase to direct expression of cloned genes.

Authors:  F W Studier; A H Rosenberg; J J Dunn; J W Dubendorff
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

2.  Use of purified isoacceptor tRNAs for the study of codon-anticodon recognition in vitro with sequenced natural messenger RNA.

Authors:  E Goldman; G W Hatfield
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

Review 3.  Bacteriophage T7.

Authors:  F W Studier
Journal:  Science       Date:  1972-04-28       Impact factor: 47.728

4.  Specificity of protein synthesis by bacterial ribosomes and initiation factors: absence of change after phage T4 infection.

Authors:  E Goldman; H F Lodish
Journal:  J Mol Biol       Date:  1972-06-14       Impact factor: 5.469

5.  Genetic mapping of a mutation that causes ribonucleases III deficiency in Escherichia coli.

Authors:  F W Studier
Journal:  J Bacteriol       Date:  1975-10       Impact factor: 3.490

6.  Effect of rate-limiting elongation on bacteriophage MS2 RNA-directed protein synthesis in extracts of Escherichia coli.

Authors:  E Goldman
Journal:  J Mol Biol       Date:  1982-07-15       Impact factor: 5.469

7.  Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elements.

Authors:  J J Dunn; F W Studier
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

  7 in total
  12 in total

1.  An analysis of sequences stimulating frameshifting in the decoding of gene 10 of bacteriophage T7.

Authors:  B G Condron; R F Gesteland; J F Atkins
Journal:  Nucleic Acids Res       Date:  1991-10-25       Impact factor: 16.971

2.  Frameshifting in gene 10 of bacteriophage T7.

Authors:  B G Condron; J F Atkins; R F Gesteland
Journal:  J Bacteriol       Date:  1991-11       Impact factor: 3.490

Review 3.  Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.

Authors:  John F Atkins; Gary Loughran; Pramod R Bhatt; Andrew E Firth; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2016-07-19       Impact factor: 16.971

Review 4.  Roger Hendrix: Gentle Provocateur.

Authors:  Sherwood R Casjens; Graham F Hatfull
Journal:  J Bacteriol       Date:  2018-04-09       Impact factor: 3.490

5.  On the directional specificity of ribosome frameshifting at a "hungry" codon.

Authors:  D Lindsley; J Gallant
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-15       Impact factor: 11.205

6.  Protocol for Differential Biopanning of P. falciparum Phage Display cDNA Library to Identify Parasite Targets of Protective Antibodies.

Authors:  Jenna Zuromski; Jonathan Kurtis; Dipak Kumar Raj
Journal:  Methods Mol Biol       Date:  2022

7.  Increased ribosomal accuracy increases a programmed translational frameshift in Escherichia coli.

Authors:  J Sipley; E Goldman
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

8.  Fluorescent T7 display phages obtained by translational frameshift.

Authors:  Erik J Slootweg; Hans J H G Keller; Mark A Hink; Jan Willem Borst; Jaap Bakker; Arjen Schots
Journal:  Nucleic Acids Res       Date:  2006-10-13       Impact factor: 16.971

9.  Phage therapy as a renewed therapeutic approach to mycobacterial infections: a comprehensive review.

Authors:  Taher Azimi; Mehrdad Mosadegh; Mohammad Javad Nasiri; Sahar Sabour; Samira Karimaei; Ahmad Nasser
Journal:  Infect Drug Resist       Date:  2019-09-17       Impact factor: 4.003

10.  Analysis of effects of tRNA:message stability on frameshift frequency at the Escherichia coli RF2 programmed frameshift site.

Authors:  J F Curran
Journal:  Nucleic Acids Res       Date:  1993-04-25       Impact factor: 16.971

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