Literature DB >> 1818754

A novel system for large-scale sequencing of cDNA by PCR amplification.

K Okubo1, N Hori, R Matoba, T Niiyama, K Matsubara.   

Abstract

We have developed a method for constructing a library containing the 3' end fragment of cDNA for large-scale sequencing of cDNA clones. The average size of the insert was 270 bp. Cell lysates that carry plasmids having the cDNA insert were subjected to PCR amplification of the cDNA moiety and the products were subjected to sequencing analysis using an autosequencer. With this protocol, sample preparation became a non-limiting step, that allowed us to sequence as many samples as the autosequencer could handle.

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Year:  1991        PMID: 1818754     DOI: 10.3109/10425179109039684

Source DB:  PubMed          Journal:  DNA Seq        ISSN: 1026-7913


  8 in total

1.  BodyMap: a collection of 3' ESTs for analysis of human gene expression information.

Authors:  S Kawamoto; J Yoshii; K Mizuno; K Ito; Y Miyamoto; T Ohnishi; R Matoba; N Hori; Y Matsumoto; T Okumura; Y Nakao; H Yoshii; J Arimoto; H Ohashi; H Nakanishi; I Ohno; J Hashimoto; K Shimizu; K Maeda; H Kuriyama; K Nishida; A Shimizu-Matsumoto; W Adachi; R Ito; S Kawasaki; K S Chae
Journal:  Genome Res       Date:  2000-11       Impact factor: 9.043

2.  Alternative gene form discovery and candidate gene selection from gene indexing projects.

Authors:  J Burke; H Wang; W Hide; D B Davison
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Adaptor-tagged competitive PCR: a novel method for measuring relative gene expression.

Authors:  K Kato
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

4.  Molecular cloning of a group of mouse pancreatic islet beta-cell-related genes by random cDNA sequencing.

Authors:  M Tanaka; R Katashima; D Murakami; K Adzuma; Y Takahashi; A Tomonari; H Iwahana; K Yoshimoto; M Itakura
Journal:  Diabetologia       Date:  1995-04       Impact factor: 10.122

5.  Construction of a gene expression profile of a human fetal liver by single-pass cDNA sequencing.

Authors:  S S Choi; J W Yun; E K Choi; Y G Cho; Y C Sung; H S Shin
Journal:  Mamm Genome       Date:  1995-09       Impact factor: 2.957

6.  d2_cluster: a validated method for clustering EST and full-length cDNAsequences.

Authors:  J Burke; D Davison; W Hide
Journal:  Genome Res       Date:  1999-11       Impact factor: 9.043

7.  A comprehensive approach to clustering of expressed human gene sequence: the sequence tag alignment and consensus knowledge base.

Authors:  R T Miller; A G Christoffels; C Gopalakrishnan; J Burke; A A Ptitsyn; T R Broveak; W A Hide
Journal:  Genome Res       Date:  1999-11       Impact factor: 9.043

8.  Characterization of soybean genomic features by analysis of its expressed sequence tags.

Authors:  Ai-Guo Tian; Jun Wang; Peng Cui; Yu-Jun Han; Hao Xu; Li-Juan Cong; Xian-Gang Huang; Xiao-Ling Wang; Yong-Zhi Jiao; Bang-Jun Wang; Yong-Jun Wang; Jin-Song Zhang; Shou-Yi Chen
Journal:  Theor Appl Genet       Date:  2003-11-18       Impact factor: 5.699

  8 in total

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