Literature DB >> 18180990

Methylibium subsaxonicum spec. nov., a betaproteobacterium Isolated from a hardwater rivulet.

Erko Stackebrandt1, Anja Frühling, Sylvie Cousin, Evelyne Brambilla, Heinrich Lünsdorf, Susanne Verbarg.   

Abstract

A single strain, designated BF49(T), was isolated from a biofilm of a tufa deposit from the Westerhöfer rivulet, Lower Saxony, Germany. The G+C content of the genomic DNA of strain BF49(T) was 69 mol% and the predominant ubiquinone was Q-8. Major fatty acids were C(16:1)omega7c/15 iso 2OH and C(16:0). Comparative 16S rRNA gene sequence analysis indicated that the isolate was placed within the genus Methylibium, class Betaproteobacteria, distantly related to the type strain Methylibium petroleiphilum LMG 22953(T) (97.4% similarity), Methylibium fulvum Gsoil 322(T )(96%), and Methylibium aquaticum IMCC1728(T )(95.7%). On the basis of phylogenetic and phenotypic distinctness we propose a novel species, Methylibium subsaxonicum sp. nov., with strain BF49(T) (DSM 19570(T), CIP 109700(T)) as the type strain.

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Year:  2008        PMID: 18180990     DOI: 10.1007/s00284-007-9095-3

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  19 in total

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Authors:  Wolfgang Ludwig; Oliver Strunk; Ralf Westram; Lothar Richter; Harald Meier; Arno Buchner; Tina Lai; Susanne Steppi; Gangolf Jobb; Wolfram Förster; Igor Brettske; Stefan Gerber; Anton W Ginhart; Oliver Gross; Silke Grumann; Stefan Hermann; Ralf Jost; Andreas König; Thomas Liss; Ralph Lüssmann; Michael May; Björn Nonhoff; Boris Reichel; Robert Strehlow; Alexandros Stamatakis; Norbert Stuckmann; Alexander Vilbig; Michael Lenke; Thomas Ludwig; Arndt Bode; Karl-Heinz Schleifer
Journal:  Nucleic Acids Res       Date:  2004-02-25       Impact factor: 16.971

2.  Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria.

Authors:  Cindy H Nakatsu; Krassimira Hristova; Satoshi Hanada; Xian-Ying Meng; Jessica R Hanson; Kate M Scow; Yoichi Kamagata
Journal:  Int J Syst Evol Microbiol       Date:  2006-05       Impact factor: 2.747

3.  The RDP (Ribosomal Database Project).

Authors:  B L Maidak; G J Olsen; N Larsen; R Overbeek; M J McCaughey; C R Woese
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  A low-viscosity epoxy resin embedding medium for electron microscopy.

Authors:  A R Spurr
Journal:  J Ultrastruct Res       Date:  1969-01

7.  The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov.

Authors:  F A Rainey; N Ward-Rainey; R M Kroppenstedt; E Stackebrandt
Journal:  Int J Syst Bacteriol       Date:  1996-10

8.  Flavobacterium aquidurense sp. nov. and Flavobacterium hercynium sp. nov., from a hard-water creek.

Authors:  Sylvie Cousin; Orsola Päuker; Erko Stackebrandt
Journal:  Int J Syst Evol Microbiol       Date:  2007-02       Impact factor: 2.747

9.  Deefgea rivuli gen. nov., sp. nov., a member of the class Betaproteobacteria.

Authors:  Erko Stackebrandt; Elke Lang; Sylvie Cousin; Orsola Päuker; Evelyne Brambilla; Reiner Kroppenstedt; Heinrich Lünsdorf
Journal:  Int J Syst Evol Microbiol       Date:  2007-03       Impact factor: 2.747

10.  The use of lead citrate at high pH as an electron-opaque stain in electron microscopy.

Authors:  E S REYNOLDS
Journal:  J Cell Biol       Date:  1963-04       Impact factor: 10.539

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