Literature DB >> 18178651

Protein structure and hydration probed by SANS and osmotic stress.

Christopher Stanley1, Susan Krueger, V Adrian Parsegian, Donald C Rau.   

Abstract

Interactions governing protein folding, stability, recognition, and activity are mediated by hydration. Here, we use small-angle neutron scattering coupled with osmotic stress to investigate the hydration of two proteins, lysozyme and guanylate kinase (GK), in the presence of solutes. By taking advantage of the neutron contrast variation that occurs upon addition of these solutes, the number of protein-associated (solute-excluded) water molecules can be estimated from changes in both the zero-angle scattering intensity and the radius of gyration. Poly(ethylene glycol) exclusion varies with molecular weight. This sensitivity can be exploited to probe structural features such as the large internal GK cavity. For GK, small-angle neutron scattering is complemented by isothermal titration calorimetry with osmotic stress to also measure hydration changes accompanying ligand binding. These results provide a framework for studying other biomolecular systems and assemblies using neutron scattering together with osmotic stress.

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Year:  2008        PMID: 18178651      PMCID: PMC2267150          DOI: 10.1529/biophysj.107.122697

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  42 in total

1.  Osmotic stress, crowding, preferential hydration, and binding: A comparison of perspectives.

Authors:  V A Parsegian; R P Rand; D C Rau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

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Journal:  Science       Date:  1992-05-01       Impact factor: 47.728

4.  Crystal structure of unligated guanylate kinase from yeast reveals GMP-induced conformational changes.

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Journal:  J Mol Biol       Date:  2001-03-16       Impact factor: 5.469

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Authors:  T Arakawa; S N Timasheff
Journal:  Biophys J       Date:  1985-03       Impact factor: 4.033

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Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

Review 7.  Hydration forces.

Authors:  S Leikin; V A Parsegian; D C Rau; R P Rand
Journal:  Annu Rev Phys Chem       Date:  1993       Impact factor: 12.703

Review 8.  The control of protein stability and association by weak interactions with water: how do solvents affect these processes?

Authors:  S N Timasheff
Journal:  Annu Rev Biophys Biomol Struct       Date:  1993

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Authors:  M S Lehmann; G Zaccai
Journal:  Biochemistry       Date:  1984-04-24       Impact factor: 3.162

10.  Steric exclusion is the principal source of the preferential hydration of proteins in the presence of polyethylene glycols.

Authors:  R Bhat; S N Timasheff
Journal:  Protein Sci       Date:  1992-09       Impact factor: 6.725

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  10 in total

1.  Hydration potential of lysozyme: protein dehydration using a single microparticle technique.

Authors:  Deborah L Rickard; P Brent Duncan; David Needham
Journal:  Biophys J       Date:  2010-03-17       Impact factor: 4.033

2.  Hydration dynamics in a partially denatured ensemble of the globular protein human alpha-lactalbumin investigated with molecular dynamics simulations.

Authors:  Neelanjana Sengupta; Simon Jaud; Douglas J Tobias
Journal:  Biophys J       Date:  2008-09-05       Impact factor: 4.033

3.  Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation.

Authors:  Utsab R Shrestha; Puneet Juneja; Qiu Zhang; Viswanathan Gurumoorthy; Jose M Borreguero; Volker Urban; Xiaolin Cheng; Sai Venkatesh Pingali; Jeremy C Smith; Hugh M O'Neill; Loukas Petridis
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-23       Impact factor: 11.205

Review 4.  Thermodynamics and solvent linkage of macromolecule-ligand interactions.

Authors:  Michael R Duff; Elizabeth E Howell
Journal:  Methods       Date:  2014-11-21       Impact factor: 3.608

5.  Protein loop compaction and the origin of the effect of arginine and glutamic acid mixtures on solubility, stability and transient oligomerization of proteins.

Authors:  Jascha Blobel; Ulrika Brath; Pau Bernadó; Carl Diehl; Lidia Ballester; Alejandra Sornosa; Mikael Akke; Miquel Pons
Journal:  Eur Biophys J       Date:  2011-03-09       Impact factor: 1.733

6.  Measuring the interaction of urea and protein-stabilizing osmolytes with the nonpolar surface of hydroxypropylcellulose.

Authors:  Christopher Stanley; Donald C Rau
Journal:  Biochemistry       Date:  2008-06-24       Impact factor: 3.162

7.  Characterization of an Extensive Interface on Vitronectin for Binding to Plasminogen Activator Inhibitor-1: Adoption of Structure in an Intrinsically Disordered Region.

Authors:  Letitia O Puster; Christopher B Stanley; Vladimir N Uversky; Joseph E Curtis; Susan Krueger; Yuzhuo Chu; Cynthia B Peterson
Journal:  Biochemistry       Date:  2019-12-16       Impact factor: 3.162

8.  Effects of macromolecular crowding on the structure of a protein complex: a small-angle scattering study of superoxide dismutase.

Authors:  Ajith Rajapaksha; Christopher B Stanley; Brian A Todd
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

9.  Aspects of Weak Interactions between Folate and Glycine Betaine.

Authors:  Purva P Bhojane; Michael R Duff; Khushboo Bafna; Gabriella P Rimmer; Pratul K Agarwal; Elizabeth E Howell
Journal:  Biochemistry       Date:  2016-11-01       Impact factor: 3.162

10.  Small Angle Neutron Scattering Studies of R67 Dihydrofolate Reductase, a Tetrameric Protein with Intrinsically Disordered N-Termini.

Authors:  Purva P Bhojane; Michael R Duff; Khushboo Bafna; Pratul Agarwal; Christopher Stanley; Elizabeth E Howell
Journal:  Biochemistry       Date:  2017-11-07       Impact factor: 3.162

  10 in total

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