Literature DB >> 18175725

Methanolinea tarda gen. nov., sp. nov., a methane-producing archaeon isolated from a methanogenic digester sludge.

Hiroyuki Imachi1, Sanae Sakai, Yuji Sekiguchi, Satoshi Hanada, Yoichi Kamagata, Akiyoshi Ohashi, Hideki Harada.   

Abstract

A novel methane-producing archaeon, strain NOBI-1(T) was isolated from an anaerobic, propionate-degradation enrichment culture, which was originally obtained from a mesophilic methanogenic sludge digesting municipal sewage sludge. Cells were non-motile, rod-shaped, 0.7-1.0 microm by 2.0 microm, and formed multicellular filaments longer than 8 microm. Growth was observed between 35 and 55 degrees C (optimum 50 degrees C) and pH 6.7 and 8.0 (optimum pH 7.0). The G+C content of the genomic DNA was 56.3 mol%. The strain utilized H(2) and formate for growth and methane production. Based on comparative sequence analyses of the 16S rRNA gene and mcrA gene (encoding the alpha subunit of methyl-coenzyme M reductase, a key enzyme in the methane-production pathway), strain NOBI-1(T) was affiliated with the order Methanomicrobiales, but it was significantly distant from any other known species within the order. The most closely related species based on 16S rRNA and mcrA gene sequence similarity were respectively 'Candidatus Methanoregula boonei' (93.7% 16S rRNA gene sequence similarity) and Methanocorpusculum parvum (74.2% deduced McrA amino acid sequence similarity to the type strain). These phenotypic and genetic properties justified the creation of a novel species of a new genus for the strain, for which we propose the name Methanolinea tarda gen. nov., sp. nov. The type strain of Methanolinea tarda is strain NOBI-1(T) (=DSM 16494(T) =JCM 12467(T) =NBRC 102358(T)).

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Year:  2008        PMID: 18175725     DOI: 10.1099/ijs.0.65394-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  25 in total

1.  Microbial community composition across a coastal hydrological system affected by submarine groundwater discharge (SGD).

Authors:  Dini Adyasari; Christiane Hassenrück; Daniel Montiel; Natasha Dimova
Journal:  PLoS One       Date:  2020-06-29       Impact factor: 3.240

2.  Cultivation of methanogens under low-hydrogen conditions by using the coculture method.

Authors:  Sanae Sakai; Hiroyuki Imachi; Yuji Sekiguchi; I-Cheng Tseng; Akiyoshi Ohashi; Hideki Harada; Yoichi Kamagata
Journal:  Appl Environ Microbiol       Date:  2009-05-22       Impact factor: 4.792

3.  Use of a hierarchical oligonucleotide primer extension approach for multiplexed relative abundance analysis of methanogens in anaerobic digestion systems.

Authors:  Jer-Horng Wu; Hui-Ping Chuang; Mao-Hsuan Hsu; Wei-Yu Chen
Journal:  Appl Environ Microbiol       Date:  2013-09-27       Impact factor: 4.792

4.  Community composition of known and uncultured archaeal lineages in anaerobic or anoxic wastewater treatment sludge.

Authors:  Kyohei Kuroda; Masashi Hatamoto; Nozomi Nakahara; Kenichi Abe; Masanobu Takahashi; Nobuo Araki; Takashi Yamaguchi
Journal:  Microb Ecol       Date:  2014-11-06       Impact factor: 4.552

5.  Pyrosequencing of mcrA and archaeal 16S rRNA genes reveals diversity and substrate preferences of methanogen communities in anaerobic digesters.

Authors:  David Wilkins; Xiao-Ying Lu; Zhiyong Shen; Jiapeng Chen; Patrick K H Lee
Journal:  Appl Environ Microbiol       Date:  2014-11-07       Impact factor: 4.792

6.  Methyl coenzyme M reductase A (mcrA) gene-based investigation of methanogens in the mudflat sediments of Yangtze River estuary, China.

Authors:  Jemaneh Zeleke; Shui-Long Lu; Jian-Gong Wang; Jing-Xin Huang; Bo Li; Andrew V Ogram; Zhe-Xue Quan
Journal:  Microb Ecol       Date:  2013-01-11       Impact factor: 4.552

7.  Bacterial and archaeal phylogenetic diversity associated with swine sludge from an anaerobic treatment lagoon.

Authors:  Juliana Cardinali-Rezende; Zelina L Pereira; José L Sanz; Edmar Chartone-Souza; Andréa M A Nascimento
Journal:  World J Microbiol Biotechnol       Date:  2012-07-25       Impact factor: 3.312

8.  Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments.

Authors:  Patrick Browne; Hideyuki Tamaki; Nikos Kyrpides; Tanja Woyke; Lynne Goodwin; Hiroyuki Imachi; Suzanna Bräuer; Joseph B Yavitt; Wen-Tso Liu; Stephen Zinder; Hinsby Cadillo-Quiroz
Journal:  ISME J       Date:  2016-08-23       Impact factor: 10.302

9.  Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium.

Authors:  Athanasios Lykidis; Chia-Lung Chen; Susannah G Tringe; Alice C McHardy; Alex Copeland; Nikos C Kyrpides; Philip Hugenholtz; Hervé Macarie; Alejandro Olmos; Oscar Monroy; Wen-Tso Liu
Journal:  ISME J       Date:  2010-08-05       Impact factor: 10.302

10.  Stratified communities of methanogens in the jiulong river estuarine sediments, southern china.

Authors:  Jinquan Chen; Xijie Yin
Journal:  Indian J Microbiol       Date:  2013-03-28       Impact factor: 2.461

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