Literature DB >> 18173377

Elastic modeling of biomembranes and lipid bilayers.

Frank L H Brown1.   

Abstract

The simulation of biological membranes over length and time scales relevant to cellular biology is not currently feasible using conventional (fully atomic or molecularly detailed) simulation strategies. Given the wide disparity between what is possible on today's computers and the problems one might like to study, it seems unlikely this situation will change for several decades. An appealing alternative to traditional computational approaches is to employ simpler, continuum-based models developed within the frameworks of elasticity theory, fluid dynamics, and statistical mechanics. Although such models have seen wide use in analytical descriptions of membrane behavior, the extension of these methods to more general situations and numerical analysis is just beginning to be explored. This article reviews continuum models for membrane behavior with an emphasis on the use of such models in computational studies. Two applications are explored to demonstrate the utility of this level of coarse-grained modeling.

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Year:  2008        PMID: 18173377     DOI: 10.1146/annurev.physchem.59.032607.093550

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  40 in total

1.  Physical model for self-organization of actin cytoskeleton and adhesion complexes at the cell front.

Authors:  Tom Shemesh; Alexander D Bershadsky; Michael M Kozlov
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

2.  Two-dimensional continuum percolation threshold for diffusing particles of nonzero radius.

Authors:  Michael J Saxton
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

3.  Interpreting membrane scattering experiments at the mesoscale: the contribution of dissipation within the bilayer.

Authors:  Max C Watson; Frank L H Brown
Journal:  Biophys J       Date:  2010-03-17       Impact factor: 4.033

4.  Nonlinearities in tilt and layer displacements of planar lipid bilayers.

Authors:  R De Vita; I W Stewart
Journal:  Eur Phys J E Soft Matter       Date:  2010-07-08       Impact factor: 1.890

5.  Tensile forces and shape entropy explain observed crista structure in mitochondria.

Authors:  M Ghochani; J D Nulton; P Salamon; T G Frey; A Rabinovitch; A R C Baljon
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

6.  Membranes: Shaping biological matter.

Authors:  Vadim A Frolov; Joshua Zimmerberg
Journal:  Nat Mater       Date:  2009-03       Impact factor: 43.841

7.  Polar chemoreceptor clustering by coupled trimers of dimers.

Authors:  Robert G Endres
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

8.  Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins.

Authors:  N Ramakrishnan; P B Sunil Kumar; Ravi Radhakrishnan
Journal:  Phys Rep       Date:  2014-10-01       Impact factor: 25.600

9.  The zipper mechanism in phagocytosis: energetic requirements and variability in phagocytic cup shape.

Authors:  Sylvain Tollis; Anna E Dart; George Tzircotis; Robert G Endres
Journal:  BMC Syst Biol       Date:  2010-11-08

Review 10.  Membrane remodeling and mechanics: Experiments and simulations of α-Synuclein.

Authors:  Ana West; Benjamin E Brummel; Anthony R Braun; Elizabeth Rhoades; Jonathan N Sachs
Journal:  Biochim Biophys Acta       Date:  2016-03-10
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