Literature DB >> 18164723

Coulomb forces control the density of the collapsed unfolded state of barstar.

Hagen Hofmann1, Ralph P Golbik, Maria Ott, Christian G Hübner, Renate Ulbrich-Hofmann.   

Abstract

Although it has been recently shown that unfolded polypeptide chains undergo a collapse on transfer from denaturing to native conditions, the forces determining the dynamics and the size of the collapsed form have not yet been understood. Here, we use single-molecule fluorescence resonance energy transfer experiments on the small protein barstar to characterize the unfolded chain in guanidinium chloride (GdmCl) and urea. The unfolded protein collapses on decreasing the concentration of denaturants. Below the critical concentration of 3.5 M denaturant, the collapse in GdmCl leads to a more dense state than in urea. Since it is known that GdmCl suppresses electrostatic interactions, we infer that Coulomb forces are the dominant forces acting in the unfolded barstar under native conditions. This hypothesis is clearly buttressed by the finding of a compaction of the unfolded barstar by addition of KCl at low urea concentrations.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 18164723     DOI: 10.1016/j.jmb.2007.11.083

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  13 in total

1.  From the Cover: Charge interactions can dominate the dimensions of intrinsically disordered proteins.

Authors:  Sonja Müller-Späth; Andrea Soranno; Verena Hirschfeld; Hagen Hofmann; Stefan Rüegger; Luc Reymond; Daniel Nettels; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-16       Impact factor: 11.205

2.  Dimensions, energetics, and denaturant effects of the protein unstructured state.

Authors:  Maodong Li; Zhirong Liu
Journal:  Protein Sci       Date:  2016-01-05       Impact factor: 6.725

3.  Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins.

Authors:  Daniel Nettels; Sonja Müller-Späth; Frank Küster; Hagen Hofmann; Dominik Haenni; Stefan Rüegger; Luc Reymond; Armin Hoffmann; Jan Kubelka; Benjamin Heinz; Klaus Gast; Robert B Best; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-20       Impact factor: 11.205

4.  Slow unfolded-state structuring in Acyl-CoA binding protein folding revealed by simulation and experiment.

Authors:  Vincent A Voelz; Marcus Jäger; Shuhuai Yao; Yujie Chen; Li Zhu; Steven A Waldauer; Gregory R Bowman; Mark Friedrichs; Olgica Bakajin; Lisa J Lapidus; Shimon Weiss; Vijay S Pande
Journal:  J Am Chem Soc       Date:  2012-07-19       Impact factor: 15.419

Review 5.  How, when and why proteins collapse: the relation to folding.

Authors:  Gilad Haran
Journal:  Curr Opin Struct Biol       Date:  2011-11-19       Impact factor: 6.809

Review 6.  Role of solvation effects in protein denaturation: from thermodynamics to single molecules and back.

Authors:  Jeremy L England; Gilad Haran
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

7.  Protein folding, protein collapse, and tanford's transfer model: lessons from single-molecule FRET.

Authors:  Guy Ziv; Gilad Haran
Journal:  J Am Chem Soc       Date:  2009-03-04       Impact factor: 15.419

8.  Denaturant-induced expansion and compaction of a multi-domain protein: IgG.

Authors:  Lin Guo; Pramit Chowdhury; Julie M Glasscock; Feng Gai
Journal:  J Mol Biol       Date:  2008-03-18       Impact factor: 5.469

9.  Conformational properties of the unfolded state of Im7 in nondenaturing conditions.

Authors:  Clare L Pashley; Gareth J Morgan; Arnout P Kalverda; Gary S Thompson; Colin Kleanthous; Sheena E Radford
Journal:  J Mol Biol       Date:  2011-12-28       Impact factor: 5.469

10.  Collapse of a long axis: single-molecule Förster resonance energy transfer and serpin equilibrium unfolding.

Authors:  Lu Liu; Michael Werner; Anne Gershenson
Journal:  Biochemistry       Date:  2014-05-01       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.