Literature DB >> 18164030

Structure of an archaeal RNA polymerase.

Anselm G Kusser1, Michela G Bertero, Souad Naji, Thomas Becker, Michael Thomm, Roland Beckmann, Patrick Cramer.   

Abstract

Related multisubunit RNA polymerases (RNAPs) carry out gene transcription in all kingdoms of life. Since structural information is limited to bacterial and eukaryotic RNAPs, we determined the cryo-electron microscopic structure of the RNAP from the thermophilic archaeon Pyrococcus furiosus at 13 A resolution. Comparison with eukaryotic RNAP II reveals a conserved architecture, no homologues for subunits Rpb8 and Rpb9, and significant deviation in the polymerase foot, jaws, pore, and protrusion. The structural organization of the archaeal RNA polymerase serves as a reference for future structure-function analysis of the transcription mechanism and allows for evolutionary comparisons.

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Year:  2007        PMID: 18164030     DOI: 10.1016/j.jmb.2007.08.066

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  21 in total

1.  Deletion of switch 3 results in an archaeal RNA polymerase that is defective in transcript elongation.

Authors:  Thomas J Santangelo; John N Reeve
Journal:  J Biol Chem       Date:  2010-05-28       Impact factor: 5.157

2.  RNA polymerase and transcription elongation factor Spt4/5 complex structure.

Authors:  Brianna J Klein; Daniel Bose; Kevin J Baker; Zahirah M Yusoff; Xiaodong Zhang; Katsuhiko S Murakami
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-27       Impact factor: 11.205

3.  Manipulating archaeal systems to permit analyses of transcription elongation-termination decisions in vitro.

Authors:  Alexandra M Gehring; Thomas J Santangelo
Journal:  Methods Mol Biol       Date:  2015

4.  RNA polymerase II-TFIIB structure and mechanism of transcription initiation.

Authors:  Dirk Kostrewa; Mirijam E Zeller; Karim-Jean Armache; Martin Seizl; Kristin Leike; Michael Thomm; Patrick Cramer
Journal:  Nature       Date:  2009-11-19       Impact factor: 49.962

5.  Molecular basis of transcription initiation in Archaea.

Authors:  Sacha De Carlo; Shih-Chieh Lin; Dylan J Taatjes; Andreas Hoenger
Journal:  Transcription       Date:  2010 Sep-Oct

6.  Evolution of two modes of intrinsic RNA polymerase transcript cleavage.

Authors:  Wenjie Ruan; Elisabeth Lehmann; Michael Thomm; Dirk Kostrewa; Patrick Cramer
Journal:  J Biol Chem       Date:  2011-03-23       Impact factor: 5.157

7.  Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicus.

Authors:  Patrizia Contursi; Raffaele Cannio; Qunxin She
Journal:  Extremophiles       Date:  2010-08-25       Impact factor: 2.395

8.  Subunit D of RNA polymerase from Methanosarcina acetivorans contains two oxygen-labile [4Fe-4S] clusters: implications for oxidant-dependent regulation of transcription.

Authors:  Faith H Lessner; Matthew E Jennings; Akira Hirata; Eduardus C Duin; Daniel J Lessner
Journal:  J Biol Chem       Date:  2012-03-28       Impact factor: 5.157

Review 9.  Archaeal RNA polymerase.

Authors:  Akira Hirata; Katsuhiko S Murakami
Journal:  Curr Opin Struct Biol       Date:  2009-10-31       Impact factor: 6.809

10.  Rearrangement of the RNA polymerase subunit H and the lower jaw in archaeal elongation complexes.

Authors:  Sebastian Grünberg; Christoph Reich; Mirijam E Zeller; Michael S Bartlett; Michael Thomm
Journal:  Nucleic Acids Res       Date:  2009-12-29       Impact factor: 16.971

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