Literature DB >> 18162115

Bayesian nonparametric meta-analysis using Polya tree mixture models.

Adam J Branscum1, Timothy E Hanson2.   

Abstract

Summary. A common goal in meta-analysis is estimation of a single effect measure using data from several studies that are each designed to address the same scientific inquiry. Because studies are typically conducted in geographically disperse locations, recent developments in the statistical analysis of meta-analytic data involve the use of random effects models that account for study-to-study variability attributable to differences in environments, demographics, genetics, and other sources that lead to heterogeneity in populations. Stemming from asymptotic theory, study-specific summary statistics are modeled according to normal distributions with means representing latent true effect measures. A parametric approach subsequently models these latent measures using a normal distribution, which is strictly a convenient modeling assumption absent of theoretical justification. To eliminate the influence of overly restrictive parametric models on inferences, we consider a broader class of random effects distributions. We develop a novel hierarchical Bayesian nonparametric Polya tree mixture (PTM) model. We present methodology for testing the PTM versus a normal random effects model. These methods provide researchers a straightforward approach for conducting a sensitivity analysis of the normality assumption for random effects. An application involving meta-analysis of epidemiologic studies designed to characterize the association between alcohol consumption and breast cancer is presented, which together with results from simulated data highlight the performance of PTMs in the presence of nonnormality of effect measures in the source population.

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Year:  2007        PMID: 18162115     DOI: 10.1111/j.1541-0420.2007.00946.x

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  7 in total

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Authors:  Timothy E Hanson; Adam J Branscum; Wesley O Johnson
Journal:  Lifetime Data Anal       Date:  2010-04-06       Impact factor: 1.588

2.  DPpackage: Bayesian Non- and Semi-parametric Modelling in R.

Authors:  Alejandro Jara; Timothy E Hanson; Fernando A Quintana; Peter Müller; Gary L Rosner
Journal:  J Stat Softw       Date:  2011-04-01       Impact factor: 6.440

3.  Rubbery Polya Tree.

Authors:  Luis E Nieto-Barajas; Peter Müller
Journal:  Scand Stat Theory Appl       Date:  2012-03       Impact factor: 1.396

4.  The choice of prior distribution for a covariance matrix in multivariate meta-analysis: a simulation study.

Authors:  Sandra M Hurtado Rúa; Madhu Mazumdar; Robert L Strawderman
Journal:  Stat Med       Date:  2015-08-24       Impact factor: 2.373

5.  Mitigating Bias in Generalized Linear Mixed Models: The Case for Bayesian Nonparametrics.

Authors:  Joseph Antonelli; Lorenzo Trippa; Sebastien Haneuse
Journal:  Stat Sci       Date:  2016-02-10       Impact factor: 2.901

6.  The Missing Medians: Exclusion of Ordinal Data from Meta-Analyses.

Authors:  Toby B Cumming; Leonid Churilov; Emily S Sena
Journal:  PLoS One       Date:  2015-12-23       Impact factor: 3.240

7.  Random-effects meta-analysis for systematic reviews of phase I clinical trials: Rare events and missing data.

Authors:  Mi-Ok Kim; Xia Wang; Chunyan Liu; Kathleen Dorris; Maryam Fouladi; Seongho Song
Journal:  Res Synth Methods       Date:  2016-06-10       Impact factor: 5.273

  7 in total

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