Literature DB >> 18160394

Structure of the bacteriophage phi KZ lytic transglycosylase gp144.

Andrei Fokine1, Konstantin A Miroshnikov, Mikhail M Shneider, Vadim V Mesyanzhinov, Michael G Rossmann.   

Abstract

Lytic transglycosylases are enzymes that act on the peptidoglycan of bacterial cell walls. They cleave the glycosidic linkage between N-acetylmuramoyl and N-acetylglucosaminyl residues with the concomitant formation of a 1,6-anhydromuramoyl product. The x-ray structure of the lytic transglycosylase gp144 from the Pseudomonas bacteriophage phi KZ has been determined to 2.5-A resolution. This protein is probably employed by the bacteriophage in the late stage of the virus reproduction cycle to destroy the bacterial cell wall to release the phage progeny. phi KZ gp144 is a 260-residue alpha-helical protein composed of a 70-residue N-terminal cell wall-binding domain and a C-terminal catalytic domain. The fold of the N-terminal domain is similar to the peptidoglycan-binding domain from Streptomyces albus G D-Ala-D-Ala carboxypeptidase and to the N-terminal prodomain of human metalloproteinases that act on extracellular matrices. The C-terminal catalytic domain of gp144 has a structural similarity to the catalytic domain of the transglycosylase Slt70 from Escherichia coli and to lysozymes. The gp144 catalytic domain has an elongated groove that can bind at least five sugar residues at sites A-E. As in other lysozymes, the peptidoglycan cleavage (catalyzed by Glu 115 in gp144) occurs between sugar-binding subsites D and E. The x-ray structure of the phi KZ transglycosylase complexed with the chitotetraose (N-acetylglucosamine)(4) has been determined to 2.6-A resolution. The N-acetylglucosamine residues of the chitotetraose bind in sites A-D.

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Year:  2007        PMID: 18160394     DOI: 10.1074/jbc.M709398200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  22 in total

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2.  The catalytic domain of the germination-specific lytic transglycosylase SleB from Bacillus anthracis displays a unique active site topology.

Authors:  Xing Jing; Howard R Robinson; Jared D Heffron; David L Popham; Florian D Schubot
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3.  Phylogenomic network and comparative genomics reveal a diverged member of the ΦKZ-related group, marine vibrio phage ΦJM-2012.

Authors:  Ho Bin Jang; Fernand F Fagutao; Seong Won Nho; Seong Bin Park; In Seok Cha; Jong Earn Yu; Jung Seok Lee; Se Pyeong Im; Takashi Aoki; Tae Sung Jung
Journal:  J Virol       Date:  2013-09-25       Impact factor: 5.103

4.  Crystal structure of the catalytic domain of the Bacillus cereus SleB protein, important in cortex peptidoglycan degradation during spore germination.

Authors:  Yunfeng Li; Kai Jin; Barbara Setlow; Peter Setlow; Bing Hao
Journal:  J Bacteriol       Date:  2012-06-22       Impact factor: 3.490

5.  Biophysical studies of the interactions between the phage varphiKZ gp144 lytic transglycosylase and model membranes.

Authors:  Isabelle Cloutier; Catherine Paradis-Bleau; Anne-Marie Giroux; Xavier Pigeon; Marjolaine Arseneault; Roger C Levesque; Michèle Auger
Journal:  Eur Biophys J       Date:  2009-08-08       Impact factor: 1.733

6.  A Mimivirus Enzyme that Participates in Viral Entry.

Authors:  Thomas Klose; Dominik A Herbst; Hanyu Zhu; Joann P Max; Hilkka I Kenttämaa; Michael G Rossmann
Journal:  Structure       Date:  2015-05-14       Impact factor: 5.006

7.  Sperm Lysozyme-Like Protein 1 (SLLP1), an intra-acrosomal oolemmal-binding sperm protein, reveals filamentous organization in protein crystal form.

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Journal:  Andrology       Date:  2015-07       Impact factor: 3.842

Review 8.  Lytic transglycosylases: concinnity in concision of the bacterial cell wall.

Authors:  David A Dik; Daniel R Marous; Jed F Fisher; Shahriar Mobashery
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-06-23       Impact factor: 8.250

9.  Genome and proteome analysis of 7-7-1, a flagellotropic phage infecting Agrobacterium sp H13-3.

Authors:  Andrew M Kropinski; An Van den Bossche; Rob Lavigne; Jean-Paul Noben; Patrick Babinger; Rüdiger Schmitt
Journal:  Virol J       Date:  2012-05-31       Impact factor: 4.099

10.  Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme.

Authors:  Moshe Dessau; Daniel Goldhill; Robert C McBride; Robert L McBride; Paul E Turner; Yorgo Modis
Journal:  PLoS Genet       Date:  2012-11-29       Impact factor: 5.917

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