Literature DB >> 18160040

Architecture of a coat for the nuclear pore membrane.

Kuo-Chiang Hsia1, Pete Stavropoulos, Günter Blobel, André Hoelz.   

Abstract

The symmetric core of the nuclear pore complex can be considered schematically as a series of concentric cylinders. A peripheral cylinder coating the pore membrane contains the previously characterized, elongated heptamer that harbors Sec13-Nup145C in its middle section. Strikingly, Sec13-Nup145C crystallizes as a hetero-octamer in two space groups. Oligomerization of Sec13-Nup145C was confirmed biochemically. Importantly, the numerous interacting surfaces in the hetero-octamer are evolutionarily highly conserved, further underlining the physiological relevance of the oligomerization. The hetero-octamer forms a slightly curved, yet rigid rod of sufficient length to span the entire height of the proposed membrane-adjacent cylinder. In concordance with the dimensions and symmetry of the nuclear pore complex core, we suggest that the cylinder is constructed of four antiparallel rings, each ring being composed of eight heptamers arranged in a head-to-tail fashion. Our model proposes that the hetero-octamer would vertically traverse and connect the four stacked rings.

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Year:  2007        PMID: 18160040      PMCID: PMC2213454          DOI: 10.1016/j.cell.2007.11.038

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  48 in total

1.  Structure of the Sec23p/24p and Sec13p/31p complexes of COPII.

Authors:  G Z Lederkremer; Y Cheng; B M Petre; E Vogan; S Springer; R Schekman; T Walz; T Kirchhausen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-04       Impact factor: 11.205

2.  Modular self-assembly of a Y-shaped multiprotein complex from seven nucleoporins.

Authors:  Malik Lutzmann; Ruth Kunze; Andrea Buerer; Ueli Aebi; Ed Hurt
Journal:  EMBO J       Date:  2002-02-01       Impact factor: 11.598

3.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

4.  Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex.

Authors:  Katsuhiko S Murakami; Shoko Masuda; Elizabeth A Campbell; Oriana Muzzin; Seth A Darst
Journal:  Science       Date:  2002-05-17       Impact factor: 47.728

5.  Proteomic analysis of nucleoporin interacting proteins.

Authors:  N P Allen; L Huang; A Burlingame; M Rexach
Journal:  J Biol Chem       Date:  2001-05-31       Impact factor: 5.157

6.  Structure and assembly of the Nup84p complex.

Authors:  S Siniossoglou; M Lutzmann; H Santos-Rosa; K Leonard; S Mueller; U Aebi; E Hurt
Journal:  J Cell Biol       Date:  2000-04-03       Impact factor: 10.539

7.  The yeast nuclear pore complex: composition, architecture, and transport mechanism.

Authors:  M P Rout; J D Aitchison; A Suprapto; K Hjertaas; Y Zhao; B T Chait
Journal:  J Cell Biol       Date:  2000-02-21       Impact factor: 10.539

8.  A conserved biogenesis pathway for nucleoporins: proteolytic processing of a 186-kilodalton precursor generates Nup98 and the novel nucleoporin, Nup96.

Authors:  B M Fontoura; G Blobel; M J Matunis
Journal:  J Cell Biol       Date:  1999-03-22       Impact factor: 10.539

9.  Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export.

Authors:  S Vasu; S Shah; A Orjalo; M Park; W H Fischer; D J Forbes
Journal:  J Cell Biol       Date:  2001-10-29       Impact factor: 10.539

10.  An evolutionarily conserved NPC subcomplex, which redistributes in part to kinetochores in mammalian cells.

Authors:  N Belgareh; G Rabut; S W Baï; M van Overbeek; J Beaudouin; N Daigle; O V Zatsepina; F Pasteau; V Labas; M Fromont-Racine; J Ellenberg; V Doye
Journal:  J Cell Biol       Date:  2001-09-17       Impact factor: 10.539

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  76 in total

1.  Crystal structure of alpha-COP in complex with epsilon-COP provides insight into the architecture of the COPI vesicular coat.

Authors:  Kuo-Chiang Hsia; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-03       Impact factor: 11.205

Review 2.  The nuclear pore complex and nuclear transport.

Authors:  Susan R Wente; Michael P Rout
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-07-14       Impact factor: 10.005

3.  A bimodal distribution of two distinct categories of intrinsically disordered structures with separate functions in FG nucleoporins.

Authors:  Justin Yamada; Joshua L Phillips; Samir Patel; Gabriel Goldfien; Alison Calestagne-Morelli; Hans Huang; Ryan Reza; Justin Acheson; Viswanathan V Krishnan; Shawn Newsam; Ajay Gopinathan; Edmond Y Lau; Michael E Colvin; Vladimir N Uversky; Michael F Rexach
Journal:  Mol Cell Proteomics       Date:  2010-04-05       Impact factor: 5.911

4.  Structure and nucleic acid binding activity of the nucleoporin Nup157.

Authors:  Hyuk-Soo Seo; Bartlomiej J Blus; Nina Z Jankovic; Günter Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-23       Impact factor: 11.205

5.  Structural evolution of the membrane-coating module of the nuclear pore complex.

Authors:  Xiaoping Liu; Jana M Mitchell; Richard W Wozniak; Günter Blobel; Jie Fan
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-26       Impact factor: 11.205

6.  Importin beta regulates the seeding of chromatin with initiation sites for nuclear pore assembly.

Authors:  Asaf Rotem; Rita Gruber; Hagai Shorer; Lihi Shaulov; Eugenia Klein; Amnon Harel
Journal:  Mol Biol Cell       Date:  2009-07-22       Impact factor: 4.138

7.  Capture of AT-rich chromatin by ELYS recruits POM121 and NDC1 to initiate nuclear pore assembly.

Authors:  Beth A Rasala; Corinne Ramos; Amnon Harel; Douglass J Forbes
Journal:  Mol Biol Cell       Date:  2008-07-02       Impact factor: 4.138

8.  Structural and functional studies of Nup107/Nup133 interaction and its implications for the architecture of the nuclear pore complex.

Authors:  Thomas Boehmer; Sandra Jeudy; Ian C Berke; Thomas U Schwartz
Journal:  Mol Cell       Date:  2008-06-20       Impact factor: 17.970

9.  Structural and functional analysis of Nup120 suggests ring formation of the Nup84 complex.

Authors:  Hyuk-Soo Seo; Yingli Ma; Erik W Debler; Daniel Wacker; Stephan Kutik; Günter Blobel; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-11       Impact factor: 11.205

10.  Structure, dynamics, evolution, and function of a major scaffold component in the nuclear pore complex.

Authors:  Parthasarathy Sampathkumar; Seung Joong Kim; Paula Upla; William J Rice; Jeremy Phillips; Benjamin L Timney; Ursula Pieper; Jeffrey B Bonanno; Javier Fernandez-Martinez; Zhanna Hakhverdyan; Natalia E Ketaren; Tsutomu Matsui; Thomas M Weiss; David L Stokes; J Michael Sauder; Stephen K Burley; Andrej Sali; Michael P Rout; Steven C Almo
Journal:  Structure       Date:  2013-03-14       Impact factor: 5.006

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