Literature DB >> 18157953

920 MHz ultra-high field NMR approaches to structural glycobiology.

Koichi Kato1, Hiroaki Sasakawa, Yukiko Kamiya, Maho Utsumi, Michiko Nakano, Noriko Takahashi, Yoshiki Yamaguchi.   

Abstract

Although NMR spectroscopy has great potential to provide us with detailed structural information on oligosaccharides and glycoconjugates, the carbohydrate NMR analyses have been hampered by the severe spectral overlapping and the insufficiency of the conformational restraints. Recently, ultra-high field NMR spectrometers have become available for applications to structural analyses of biological macromolecules. Here we demonstrate that ultra-high fields offer not only increases in sensitivity and chemical shift dispersion but also potential benefits for providing unique information on chemical exchange and relaxation, by displaying NMR spectral data of oligosaccharide, glycoprotein, and glycolipid systems recorded at a 21.6 T magnetic field (corresponding to 920 MHz (1)H observation frequency). The ultra-high field NMR spectroscopy combined with sugar library and stable-isotope labeling approaches will open new horizons in structural glycobiology.

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Year:  2007        PMID: 18157953     DOI: 10.1016/j.bbagen.2007.11.014

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

Review 1.  Recent advances in segmental isotope labeling of proteins: NMR applications to large proteins and glycoproteins.

Authors:  Lenka Skrisovska; Mario Schubert; Frédéric H-T Allain
Journal:  J Biomol NMR       Date:  2009-08-19       Impact factor: 2.835

2.  Overexpression of a homogeneous oligosaccharide with 13C labeling by genetically engineered yeast strain.

Authors:  Yukiko Kamiya; Sayoko Yamamoto; Yasunori Chiba; Yoshifumi Jigami; Koichi Kato
Journal:  J Biomol NMR       Date:  2011-06-23       Impact factor: 2.835

Review 3.  Lipid glycosylation: a primer for histochemists and cell biologists.

Authors:  Jürgen Kopitz
Journal:  Histochem Cell Biol       Date:  2016-12-20       Impact factor: 4.304

Review 4.  Experimental and computational characterization of dynamic biomolecular interaction systems involving glycolipid glycans.

Authors:  Koichi Kato; Takumi Yamaguchi; Maho Yagi-Utsumi
Journal:  Glycoconj J       Date:  2022-03-17       Impact factor: 2.916

5.  Structural Analysis of Oligosaccharides and Glycoconjugates Using NMR.

Authors:  Yoshiki Yamaguchi; Takumi Yamaguchi; Koichi Kato
Journal:  Adv Neurobiol       Date:  2023

6.  Up-and-down topological mode of amyloid beta-peptide lying on hydrophilic/hydrophobic interface of ganglioside clusters.

Authors:  Maho Utsumi; Yoshiki Yamaguchi; Hiroaki Sasakawa; Naoki Yamamoto; Katsuhiko Yanagisawa; Koichi Kato
Journal:  Glycoconj J       Date:  2009-11       Impact factor: 2.916

7.  Functional network of glycan-related molecules: glyco-net in glycoconjugate data bank.

Authors:  Ryo Hashimoto; Kazuko Hirose; Taku Sato; Nobuhiro Fukushima; Nobuaki Miura; Shin-Ichiro Nishimura
Journal:  BMC Syst Biol       Date:  2010-06-29

8.  Application of paramagnetic NMR-validated molecular dynamics simulation to the analysis of a conformational ensemble of a branched oligosaccharide.

Authors:  Ying Zhang; Sayoko Yamamoto; Takumi Yamaguchi; Koichi Kato
Journal:  Molecules       Date:  2012-05-31       Impact factor: 4.411

9.  Application of Metabolic 13C Labeling in Conjunction with High-Field Nuclear Magnetic Resonance Spectroscopy for Comparative Conformational Analysis of High Mannose-Type Oligosaccharides.

Authors:  Yukiko Kamiya; Kotaro Yanagi; Toshihiko Kitajima; Takumi Yamaguchi; Yasunori Chiba; Koichi Kato
Journal:  Biomolecules       Date:  2013-01-25
  9 in total

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