Literature DB >> 18096345

Deinococcus misasensis and Deinococcus roseus, novel members of the genus Deinococcus, isolated from a radioactive site in Japan.

Dalal Asker1, Tarek S Awad, Teruhiko Beppu, Kenji Ueda.   

Abstract

Two gamma- and UV-radiation resistant, Gram-positive, red- or pink-pigmented, rod-shaped, strictly aerobic, oxidase- and catalase-positive bacterial strains, TDMA-25T and TDMA-uv51T, were isolated from fresh water collected at Misasa, a radioactive site in Japan. Phylogenetic analysis based on 16S rRNA gene sequences placed both in a distinct lineage in the family Deinococcaceae, and the highest degrees of sequence similarity determined belonged to Deinococcus maricopensis LB-34T (88.8-89.3%), Deinococcus pimensis KR-235T (86.4-86.7%) and Deinococcus yavapaiensis KR-236T (86.1%). The DNA G+C content of the strains was 53-58 mol%. The major respiratory quinone was MK-8. The predominant fatty acids were C15:0 iso, C16:0 iso, C13:0 iso, C17:0 iso, C16:0, C13:0 anteiso, C15:0 and C12:0 iso. The strains degraded gelatin, casein, starch and Tween 80. Unique physiological characteristics, differences in their fatty acid profiles, and genotypic and phylogenetic features, differentiated strains TDMA-25T and TDMA-uv51T from closely related Deinococcus species. Hence, the two strains are described as novel species of the genus Deinococcus. The names Deinococcus misasensis sp. nov. (type strain TDMA-25T=JCM 14369=NBRC 102116=CCUG 53610) and Deinococcus roseus sp. nov. (type strain TDMA-uv51T=JCM 14370=NBRC 102117=CCUG 53611) are proposed.

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Year:  2007        PMID: 18096345     DOI: 10.1016/j.syapm.2007.10.002

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  7 in total

1.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

2.  Complete genome sequence of Deinococcus maricopensis type strain (LB-34).

Authors:  Rüdiger Pukall; Ahmet Zeytun; Susan Lucas; Alla Lapidus; Nancy Hammon; Shweta Deshpande; Matt Nolan; Jan-Fang Cheng; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Mikhailova; Natalia Ivanova; Konstantinos Mavromatis; Amrita Pati; Roxane Tapia; Cliff Han; Lynne Goodwin; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Evelyne-Marie Brambilla; Manfred Rohde; Markus Göker; J Chris Detter; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2011-04-25

Review 3.  Marine extremophiles: a source of hydrolases for biotechnological applications.

Authors:  Gabriel Zamith Leal Dalmaso; Davis Ferreira; Alane Beatriz Vermelho
Journal:  Mar Drugs       Date:  2015-04-03       Impact factor: 5.118

4.  Genome Sequence of a Gamma- and UV-Ray-Resistant Strain, Deinococcus wulumuqiensis R12.

Authors:  Xian Xu; Ling Jiang; Zhidong Zhang; Yuhu Shi; He Huang
Journal:  Genome Announc       Date:  2013-05-09

5.  Draft Genome Sequence of Deinococcus xibeiensis R13, a New Carotenoid-Producing Strain.

Authors:  Yaochi Hu; Xian Xu; Ping Song; Ling Jiang; Zhidong Zhang; He Huang
Journal:  Genome Announc       Date:  2013-12-05

6.  Draft Genome Sequence of Deinococcus sp. Strain RL Isolated from Sediments of a Hot Water Spring.

Authors:  Nitish Kumar Mahato; Charu Tripathi; Helianthous Verma; Neha Singh; Rup Lal
Journal:  Genome Announc       Date:  2014-07-17

7.  MALDI-TOF MS Affords Discrimination of Deinococcus aquaticus Isolates Obtained From Diverse Biofilm Habitats.

Authors:  James M Tuohy; Sabrina R Mueller-Spitz; Chad M Albert; Stacy E Scholz-Ng; Melinda E Wall; George T Noutsios; Anthony J Gutierrez; Todd R Sandrin
Journal:  Front Microbiol       Date:  2018-10-15       Impact factor: 5.640

  7 in total

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