Literature DB >> 18085538

Noncovalent keystone interactions controlling biomembrane structure.

Roger G Hanshaw1, Robert V Stahelin, Bradley D Smith.   

Abstract

There is a biomedical need to develop molecular recognition systems that selectively target the interfaces of protein and lipid aggregates in biomembranes. This is an extremely challenging problem in supramolecular chemistry because the biological membrane is a complex dynamic assembly of multifarious molecular components with local inhomogeneity. Two simplifying concepts are presented as a framework for basing molecular design strategies. The first generalization is that association of two binding partners in a biomembrane will be dominated by one type of non-covalent interaction which is referred to as the keystone interaction. Structural mutations in membrane proteins that alter the strength of this keystone interaction will likely have a major effect on biological activity and often will be associated with disease. The second generalization is to view the structure of a cell membrane as three spatial regions, that is, the polar membrane surface, the midpolar interfacial region and the non-polar membrane interior. Each region has a distinct dielectric, and the dominating keystone interaction between binding partners will be different. At the highly polar membrane surface, the keystone interactions between charged binding partners are ion-ion and ion-dipole interactions; whereas, ion-dipole and ionic hydrogen bonding are very influential at the mid-polar interfacial region. In the non-polar membrane interior, van der Waals forces and neutral hydrogen bonding are the keystone interactions that often drive molecular association. Selected examples of lipid and transmembrane protein association systems are described to illustrate how the association thermodynamics and kinetics are dominated by these keystone noncovalent interactions.

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Mesh:

Year:  2008        PMID: 18085538      PMCID: PMC2857542          DOI: 10.1002/chem.200701589

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  54 in total

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2.  Drug discovery: a historical perspective.

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3.  The GxxxG motif: a framework for transmembrane helix-helix association.

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4.  The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions.

Authors:  A Senes; I Ubarretxena-Belandia; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

5.  G protein-coupled receptors self-assemble in dynamics simulations of model bilayers.

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Review 6.  HER2/neu: mechanisms of dimerization/oligomerization.

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7.  Differential roles of ionic, aliphatic, and aromatic residues in membrane-protein interactions: a surface plasmon resonance study on phospholipases A2.

Authors:  R V Stahelin; W Cho
Journal:  Biochemistry       Date:  2001-04-17       Impact factor: 3.162

Review 8.  Sphingolipids in mammalian cell signalling.

Authors:  J Ohanian; V Ohanian
Journal:  Cell Mol Life Sci       Date:  2001-12       Impact factor: 9.261

9.  Structure of the transmembrane dimer interface of glycophorin A in membrane bilayers.

Authors:  S O Smith; D Song; S Shekar; M Groesbeek; M Ziliox; S Aimoto
Journal:  Biochemistry       Date:  2001-06-05       Impact factor: 3.162

10.  LeuT-desipramine structure reveals how antidepressants block neurotransmitter reuptake.

Authors:  Zheng Zhou; Juan Zhen; Nathan K Karpowich; Regina M Goetz; Christopher J Law; Maarten E A Reith; Da-Neng Wang
Journal:  Science       Date:  2007-08-09       Impact factor: 47.728

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  11 in total

Review 1.  Cellular membranes and lipid-binding domains as attractive targets for drug development.

Authors:  C G Sudhahar; R M Haney; Y Xue; R V Stahelin
Journal:  Curr Drug Targets       Date:  2008-08       Impact factor: 3.465

2.  Structural adaptations of proteins to different biological membranes.

Authors:  Irina D Pogozheva; Stephanie Tristram-Nagle; Henry I Mosberg; Andrei L Lomize
Journal:  Biochim Biophys Acta       Date:  2013-06-27

Review 3.  Imaging and therapeutic applications of zinc(ii)-dipicolylamine molecular probes for anionic biomembranes.

Authors:  Douglas R Rice; Kasey J Clear; Bradley D Smith
Journal:  Chem Commun (Camb)       Date:  2016-07-07       Impact factor: 6.222

4.  Modular synthesis of biologically active phosphatidic acid probes using click chemistry.

Authors:  Matthew D Smith; Christopher G Sudhahar; Denghuang Gong; Robert V Stahelin; Michael D Best
Journal:  Mol Biosyst       Date:  2009-05-07

5.  Anisotropic solvent model of the lipid bilayer. 2. Energetics of insertion of small molecules, peptides, and proteins in membranes.

Authors:  Andrei L Lomize; Irina D Pogozheva; Henry I Mosberg
Journal:  J Chem Inf Model       Date:  2011-03-25       Impact factor: 4.956

6.  Optical imaging of mammary and prostate tumors in living animals using a synthetic near infrared zinc(II)-dipicolylamine probe for anionic cell surfaces.

Authors:  Bryan A Smith; Walter J Akers; W Matthew Leevy; Andrew J Lampkins; Shuzhang Xiao; William Wolter; Mark A Suckow; Samuel Achilefu; Bradley D Smith
Journal:  J Am Chem Soc       Date:  2010-01-13       Impact factor: 15.419

7.  Anion transport properties of amine and amide-sidechained peptides are affected by charge and phospholipid composition.

Authors:  Lei You; Ruiqiong Li; George W Gokel
Journal:  Org Biomol Chem       Date:  2008-06-16       Impact factor: 3.876

8.  Effect of Bridging Anions on the Structure and Stability of Phenoxide Bridged Zinc Dipicolylamine Coordination Complexes.

Authors:  Edward J O'Neil; Hua Jiang; Bradley D Smith
Journal:  Supramol Chem       Date:  2013-06-01       Impact factor: 1.688

Review 9.  Life at the border: adaptation of proteins to anisotropic membrane environment.

Authors:  Irina D Pogozheva; Henry I Mosberg; Andrei L Lomize
Journal:  Protein Sci       Date:  2014-07-02       Impact factor: 6.725

10.  Biochemical characterization of the interaction between HspA1A and phospholipids.

Authors:  Chelsea McCallister; Brianna Kdeiss; Nikolas Nikolaidis
Journal:  Cell Stress Chaperones       Date:  2015-09-05       Impact factor: 3.667

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