Literature DB >> 18081010

Alternative splicing: current perspectives.

Eddo Kim1, Amir Goren, Gil Ast.   

Abstract

Alternative splicing is a well-characterized mechanism by which multiple transcripts are generated from a single mRNA precursor. By allowing production of several protein isoforms from one pre-mRNA, alternative splicing contributes to proteomic diversity. But what do we know about the origin of this mechanism? Do the same evolutionary forces apply to alternatively and constitutively splice exons? Do similar forces act on all types of alternative splicing? Are the products generated by alternative splicing functional? Why is "improper" recognition of exons and introns allowed by the splicing machinery? In this review, we summarize the current knowledge regarding these issues from an evolutionary perspective. (c) 2007 Wiley Periodicals, Inc.

Mesh:

Year:  2008        PMID: 18081010     DOI: 10.1002/bies.20692

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  96 in total

1.  Quantification of Hepatic UDP glucuronosyltransferase 1A splice variant expression and correlation of UDP glucuronosyltransferase 1A1 variant expression with glucuronidation activity.

Authors:  Nathan R Jones; Dongxiao Sun; Willard M Freeman; Philip Lazarus
Journal:  J Pharmacol Exp Ther       Date:  2012-06-01       Impact factor: 4.030

Review 2.  Biomedical impact of splicing mutations revealed through exome sequencing.

Authors:  Bahar Taneri; Esra Asilmaz; Terry Gaasterland
Journal:  Mol Med       Date:  2012-03-30       Impact factor: 6.354

3.  Functional implications of the emergence of alternative splicing in hnRNP A/B transcripts.

Authors:  Siew Ping Han; Karin S Kassahn; Adam Skarshewski; Mark A Ragan; Joseph A Rothnagel; Ross Smith
Journal:  RNA       Date:  2010-07-22       Impact factor: 4.942

Review 4.  Alternative splicing and evolution: diversification, exon definition and function.

Authors:  Hadas Keren; Galit Lev-Maor; Gil Ast
Journal:  Nat Rev Genet       Date:  2010-04-08       Impact factor: 53.242

5.  The expression profile of the major mouse SPO11 isoforms indicates that SPO11beta introduces double strand breaks and suggests that SPO11alpha has an additional role in prophase in both spermatocytes and oocytes.

Authors:  Marina A Bellani; Kingsley A Boateng; Dianne McLeod; R Daniel Camerini-Otero
Journal:  Mol Cell Biol       Date:  2010-07-20       Impact factor: 4.272

6.  Silencing and transcriptional properties of the imprinted Airn ncRNA are independent of the endogenous promoter.

Authors:  Stefan H Stricker; Laura Steenpass; Florian M Pauler; Federica Santoro; Paulina A Latos; Ru Huang; Martha V Koerner; Mathew A Sloane; Katarzyna E Warczok; Denise P Barlow
Journal:  EMBO J       Date:  2008-11-13       Impact factor: 11.598

7.  Evidence of uneven selective pressure on different subsets of the conserved human genome; implications for the significance of intronic and intergenic DNA.

Authors:  Scott Davidson; Andrew Starkey; Alasdair MacKenzie
Journal:  BMC Genomics       Date:  2009-12-16       Impact factor: 3.969

Review 8.  Alternative splicing and disease.

Authors:  Jamal Tazi; Nadia Bakkour; Stefan Stamm
Journal:  Biochim Biophys Acta       Date:  2008-10-17

Review 9.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

10.  Transcription of the rat testis-specific Rtdpoz-T1 and -T2 retrogenes during embryo development: co-transcription and frequent exonisation of transposable element sequences.

Authors:  Chiu-Jung Huang; Wan-Yi Lin; Che-Ming Chang; Kong-Bung Choo
Journal:  BMC Mol Biol       Date:  2009-07-25       Impact factor: 2.946

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