Literature DB >> 18081004

Repressing the neuron within.

William G Fairbrother1, Will Fairbrother, Diane Lipscombe.   

Abstract

A myriad of coordinated signals control cellular differentiation. Reprogramming the cell's proteome drives global changes in cell morphology and function that define cell phenotype. A switch in alternative splicing of many pre-mRNAs encoding neuronal-specific proteins accompanies neuronal differentiation. Three groups recently showed that the global splicing repressor, polypyrimidine track-binding protein (PTB), regulates this switch.1-3 Although a subset of neuronal genes are turned on in both non-neuronal and neuronal cells, restricted expression of PTB in non-neuronal cells diverts their mRNAs to nonsense-mediated decay and prevents protein expression. When the PTB brake is released, the cell splices like a neuron. (c) 2007 Wiley Periodicals, Inc.

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Year:  2008        PMID: 18081004      PMCID: PMC2593115          DOI: 10.1002/bies.20696

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  18 in total

Review 1.  Neuronal proteins custom designed by alternative splicing.

Authors:  Diane Lipscombe
Journal:  Curr Opin Neurobiol       Date:  2005-06       Impact factor: 6.627

2.  A brain-specific microRNA regulates dendritic spine development.

Authors:  Gerhard M Schratt; Fabian Tuebing; Elizabeth A Nigh; Christina G Kane; Mary E Sabatini; Michael Kiebler; Michael E Greenberg
Journal:  Nature       Date:  2006-01-19       Impact factor: 49.962

Review 3.  RNA binding proteins and the regulation of neuronal synaptic plasticity.

Authors:  Jernej Ule; Robert B Darnell
Journal:  Curr Opin Neurobiol       Date:  2006-01-18       Impact factor: 6.627

4.  MicroRNA: microRNAs reach out into dendrites.

Authors:  Hwan-Ching Tai; Erin M Schuman
Journal:  Curr Biol       Date:  2006-02-21       Impact factor: 10.834

5.  Coordinate repression of a trio of neuron-specific splicing events by the splicing regulator PTB.

Authors:  L Zhang; W Liu; P J Grabowski
Journal:  RNA       Date:  1999-01       Impact factor: 4.942

6.  MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development.

Authors:  Paul L Boutz; Geetanjali Chawla; Peter Stoilov; Douglas L Black
Journal:  Genes Dev       Date:  2007-01-01       Impact factor: 11.361

7.  Novel modes of splicing repression by PTB.

Authors:  Rachel Spellman; Christopher W J Smith
Journal:  Trends Biochem Sci       Date:  2006-01-05       Impact factor: 13.807

8.  Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate pre-mRNA splicing.

Authors:  Rebeca Martinez-Contreras; Jean-François Fisette; Faiz-ul Hassan Nasim; Richard Madden; Mélanie Cordeau; Benoit Chabot
Journal:  PLoS Biol       Date:  2006-01-10       Impact factor: 8.029

9.  Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1.

Authors:  Rachel Spellman; Miriam Llorian; Christopher W J Smith
Journal:  Mol Cell       Date:  2007-08-03       Impact factor: 17.970

10.  A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons.

Authors:  Paul L Boutz; Peter Stoilov; Qin Li; Chia-Ho Lin; Geetanjali Chawla; Kristin Ostrow; Lily Shiue; Manuel Ares; Douglas L Black
Journal:  Genes Dev       Date:  2007-07-01       Impact factor: 11.361

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  8 in total

Review 1.  Lens Biology is a Dimension of Neurobiology.

Authors:  Peter Frederikse; Chinnaswamy Kasinathan
Journal:  Neurochem Res       Date:  2017-02-04       Impact factor: 3.996

2.  RNA helicase p68 (DDX5) regulates tau exon 10 splicing by modulating a stem-loop structure at the 5' splice site.

Authors:  Amar Kar; Kazuo Fushimi; Xiaohong Zhou; Payal Ray; Chen Shi; Xiaoping Chen; Zhiren Liu; She Chen; Jane Y Wu
Journal:  Mol Cell Biol       Date:  2011-02-22       Impact factor: 4.272

Review 3.  Alternative splicing: functional diversity among voltage-gated calcium channels and behavioral consequences.

Authors:  Diane Lipscombe; Arturo Andrade; Summer E Allen
Journal:  Biochim Biophys Acta       Date:  2012-09-26

4.  A role for polypyrimidine tract binding protein in the establishment of focal adhesions.

Authors:  Ivan Babic; Shalini Sharma; Douglas L Black
Journal:  Mol Cell Biol       Date:  2009-08-10       Impact factor: 4.272

5.  Y65C missense mutation in the WW domain of the Golabi-Ito-Hall syndrome protein PQBP1 affects its binding activity and deregulates pre-mRNA splicing.

Authors:  Victor E Tapia; Emilia Nicolaescu; Caleb B McDonald; Valeria Musi; Tsutomu Oka; Yujin Inayoshi; Adam C Satteson; Virginia Mazack; Jasper Humbert; Christian J Gaffney; Monique Beullens; Charles E Schwartz; Christiane Landgraf; Rudolf Volkmer; Annalisa Pastore; Amjad Farooq; Mathieu Bollen; Marius Sudol
Journal:  J Biol Chem       Date:  2010-04-21       Impact factor: 5.157

6.  Next-generation SELEX identifies sequence and structural determinants of splicing factor binding in human pre-mRNA sequence.

Authors:  Daniel C Reid; Brian L Chang; Samuel I Gunderson; Lauren Alpert; William A Thompson; William G Fairbrother
Journal:  RNA       Date:  2009-10-27       Impact factor: 4.942

7.  Regulation of the mutually exclusive exons 8a and 8 in the CaV1.2 calcium channel transcript by polypyrimidine tract-binding protein.

Authors:  Zhen Zhi Tang; Shalini Sharma; Sika Zheng; Geetanjali Chawla; Julia Nikolic; Douglas L Black
Journal:  J Biol Chem       Date:  2011-01-31       Impact factor: 5.157

8.  HuB/C/D, nPTB, REST4, and miR-124 regulators of neuronal cell identity are also utilized in the lens.

Authors:  Claudine L Bitel; Nora I Perrone-Bizzozero; Peter H Frederikse
Journal:  Mol Vis       Date:  2010-11-04       Impact factor: 2.367

  8 in total

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