Literature DB >> 16403634

Novel modes of splicing repression by PTB.

Rachel Spellman1, Christopher W J Smith.   

Abstract

Polypyrimidine-tract-binding protein (PTB) is a repressive regulator of alternative splicing. Models for PTB activity have ranged from simple binding competition with splicing factor U2AF(65) at regulated polypyrimidine tracts to looping out of repressed exons by binding of PTB to flanking sites. Structural analysis of PTB bound to RNA suggests how PTB monomers can induce loops, but two recent publications indicate that repression by PTB involves more than just binding to RNA.

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Year:  2006        PMID: 16403634     DOI: 10.1016/j.tibs.2005.12.003

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  87 in total

1.  Ptbp2 Controls an Alternative Splicing Network Required for Cell Communication during Spermatogenesis.

Authors:  Molly M Hannigan; Leah L Zagore; Donny D Licatalosi
Journal:  Cell Rep       Date:  2017-06-20       Impact factor: 9.423

2.  The MicroRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing.

Authors:  Eugene V Makeyev; Jiangwen Zhang; Monica A Carrasco; Tom Maniatis
Journal:  Mol Cell       Date:  2007-08-03       Impact factor: 17.970

3.  mRNA maturation by two-step trans-splicing/polyadenylation processing in trypanosomes.

Authors:  Adriana V Jäger; Javier G De Gaudenzi; Alejandro Cassola; Iván D'Orso; Alberto C Frasch
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-31       Impact factor: 11.205

4.  Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes.

Authors:  Schraga H Schwartz; João Silva; David Burstein; Tal Pupko; Eduardo Eyras; Gil Ast
Journal:  Genome Res       Date:  2007-11-21       Impact factor: 9.043

5.  U1 snRNA directly interacts with polypyrimidine tract-binding protein during splicing repression.

Authors:  Shalini Sharma; Christophe Maris; Frédéric H-T Allain; Douglas L Black
Journal:  Mol Cell       Date:  2011-03-04       Impact factor: 17.970

6.  HnRNP proteins controlled by c-Myc deregulate pyruvate kinase mRNA splicing in cancer.

Authors:  Charles J David; Mo Chen; Marcela Assanah; Peter Canoll; James L Manley
Journal:  Nature       Date:  2009-12-13       Impact factor: 49.962

7.  Roles of polypyrimidine tract binding proteins in major immediate-early gene expression and viral replication of human cytomegalovirus.

Authors:  Ruth S Cruz Cosme; Yasuhiro Yamamura; Qiyi Tang
Journal:  J Virol       Date:  2009-01-14       Impact factor: 5.103

Review 8.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

9.  Rapid changes of mRNA-binding protein levels following glucose and 3-isobutyl-1-methylxanthine stimulation of insulinoma INS-1 cells.

Authors:  Christin Süss; Cornelia Czupalla; Christof Winter; Theresia Pursche; Klaus-Peter Knoch; Michael Schroeder; Bernard Hoflack; Michele Solimena
Journal:  Mol Cell Proteomics       Date:  2008-10-14       Impact factor: 5.911

10.  TDP-43 functions within a network of hnRNP proteins to inhibit the production of a truncated human SORT1 receptor.

Authors:  Fatemeh Mohagheghi; Mercedes Prudencio; Cristiana Stuani; Casey Cook; Karen Jansen-West; Dennis W Dickson; Leonard Petrucelli; Emanuele Buratti
Journal:  Hum Mol Genet       Date:  2015-11-27       Impact factor: 6.150

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