Literature DB >> 18075757

The interaction domains of the plant Myc-like bHLH transcription factors can regulate the transactivation strength.

Sitakanta Pattanaik1, Claire H Xie, Ling Yuan.   

Abstract

The N-terminal region of the plant Myc-like basic helix-loop-helix transcription factors (bHLH TFs) contains two domains. Approximately, 190 amino acids at the N-terminus comprise an interaction domain, a.k.a. Myb-interacting-region (MIR) for its primary function of interacting with Myb-like TFs. Following, the interaction domain is an activation (or acidic) domain responsible for transactivation. We have previously discovered that a lysine to methionine substitution (K157M) in the interaction domain of Myc-RP of Perilla frutescens leads to a 50-fold increase in transactivation activity. The result suggests that mutations in the interaction domain affect transactivation. The highly conserved nature of this lysine residue in many Myc-like bHLH TFs prompted us to explore the functional importance of this residue within the TF family and the influence of the interaction domain on the activation domain in transactivation. We found that the replacement of the equivalent lysine with methionine significantly affects the transactivation activities of two other Myc-RP homologues, Delila from snapdragon and Lc from maize. In addition to methionine, substitution with several other amino acids at this position has positive effects on transcriptional activity. A neighboring conserved alanine residue (A159 in Myc-RP, A161 in Delila and A172 in Lc) also affects transactivation. Substitution of this alanine residue to an aspartic acid abolished transactivation of both Myc-RP and Delila and severely reduced transactivation of Lc. Ectopic expression of a Myc-RP K157M mutant in transgenic tobacco resulted in increased anthocyanin accumulation compared to plants expressing the wild-type gene. Our study reveals the potential cooperation between functional domains of the bHLH TFs.

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Year:  2007        PMID: 18075757     DOI: 10.1007/s00425-007-0676-y

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  31 in total

1.  Identification of the residues in the Myb domain of maize C1 that specify the interaction with the bHLH cofactor R.

Authors:  E Grotewold; M B Sainz; L Tagliani; J M Hernandez; B Bowen; V L Chandler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

Review 2.  Mechanisms of action of transcription activation and repression domains.

Authors:  S G Roberts
Journal:  Cell Mol Life Sci       Date:  2000-08       Impact factor: 9.261

3.  Dominant alleles of the basic helix-loop-helix transcription factor ATR2 activate stress-responsive genes in Arabidopsis.

Authors:  Gromoslaw A Smolen; Laura Pawlowski; Sharon E Wilensky; Judith Bender
Journal:  Genetics       Date:  2002-07       Impact factor: 4.562

4.  Directed evolution of plant basic helix-loop-helix transcription factors for the improvement of transactivational properties.

Authors:  Sitakanta Pattanaik; Claire H Xie; Que Kong; Katherine A Shen; Ling Yuan
Journal:  Biochim Biophys Acta       Date:  2006-05-13

5.  Regulation of Arabidopsis thaliana 4-coumarate:coenzyme-A ligase-1 expression by artificial zinc finger chimeras.

Authors:  Juan Pablo Sánchez; Christopher Ullman; Michael Moore; Yen Choo; Nam-Hai Chua
Journal:  Plant Biotechnol J       Date:  2006-01       Impact factor: 9.803

6.  Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.

Authors:  Xiaoxing Li; Xuepeng Duan; Haixiong Jiang; Yujin Sun; Yuanping Tang; Zheng Yuan; Jingkang Guo; Wanqi Liang; Liang Chen; Jingyuan Yin; Hong Ma; Jian Wang; Dabing Zhang
Journal:  Plant Physiol       Date:  2006-08       Impact factor: 8.340

Review 7.  Flavonoids: a colorful model for the regulation and evolution of biochemical pathways.

Authors:  Ronald Koes; Walter Verweij; Francesca Quattrocchio
Journal:  Trends Plant Sci       Date:  2005-05       Impact factor: 18.313

8.  A constitutively expressed Myc-like gene involved in anthocyanin biosynthesis from Perilla frutescens: molecular characterization, heterologous expression in transgenic plants and transactivation in yeast cells.

Authors:  Z Z Gong; E Yamagishi; M Yamazaki; K Saito
Journal:  Plant Mol Biol       Date:  1999-09       Impact factor: 4.076

9.  GL3 encodes a bHLH protein that regulates trichome development in arabidopsis through interaction with GL1 and TTG1.

Authors:  C T Payne; F Zhang; A M Lloyd
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

10.  Transactivation of anthocyanin biosynthetic genes following transfer of B regulatory genes into maize tissues.

Authors:  S A Goff; T M Klein; B A Roth; M E Fromm; K C Cone; J P Radicella; V L Chandler
Journal:  EMBO J       Date:  1990-08       Impact factor: 11.598

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  22 in total

1.  Flavonoid-related basic helix-loop-helix regulators, NtAn1a and NtAn1b, of tobacco have originated from two ancestors and are functionally active.

Authors:  Yanhong Bai; Sitakanta Pattanaik; Barunava Patra; Joshua R Werkman; Claire H Xie; Ling Yuan
Journal:  Planta       Date:  2011-04-12       Impact factor: 4.116

2.  Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.).

Authors:  J T Matus; M J Poupin; P Cañón; E Bordeu; J A Alcalde; P Arce-Johnson
Journal:  Plant Mol Biol       Date:  2010-01-29       Impact factor: 4.076

3.  bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis.

Authors:  Henning Frerigmann; Bettina Berger; Tamara Gigolashvili
Journal:  Plant Physiol       Date:  2014-07-21       Impact factor: 8.340

4.  Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco.

Authors:  Sitakanta Pattanaik; Que Kong; David Zaitlin; Joshua R Werkman; Claire H Xie; Barunava Patra; Ling Yuan
Journal:  Planta       Date:  2010-02-16       Impact factor: 4.116

5.  Metabolomics and transcriptome analysis of the biosynthesis mechanism of flavonoids in the seeds of Euryale ferox Salisb at different developmental stages.

Authors:  Peng Wu; Ailian Liu; LiangJun Li
Journal:  Mol Genet Genomics       Date:  2021-05-19       Impact factor: 3.291

6.  Engineering lower inhibitor affinities in β-D-xylosidase of Selenomonas ruminantium by site-directed mutagenesis of Trp145.

Authors:  Douglas B Jordan; Kurt Wagschal; Zhanmin Fan; Ling Yuan; Jay D Braker; Chamroeun Heng
Journal:  J Ind Microbiol Biotechnol       Date:  2011-04-29       Impact factor: 3.346

7.  A spontaneous dominant-negative mutation within a 35S::AtMYB90 transgene inhibits flower pigment production in tobacco.

Authors:  Jeff Velten; Cahid Cakir; Christopher I Cazzonelli
Journal:  PLoS One       Date:  2010-03-29       Impact factor: 3.240

8.  Promoter analysis reveals cis-regulatory motifs associated with the expression of the WRKY transcription factor CrWRKY1 in Catharanthus roseus.

Authors:  Zhirong Yang; Barunava Patra; Runzhi Li; Sitakanta Pattanaik; Ling Yuan
Journal:  Planta       Date:  2013-08-27       Impact factor: 4.116

9.  Structural and functional organization of the MYC transcriptional factors in Camellia sinensis.

Authors:  Sangtian Chen; Yaze Kong; Xueying Zhang; Zhenfeng Liao; Yuqing He; Linying Li; Zongsuo Liang; Qing Sheng; Gaojie Hong
Journal:  Planta       Date:  2021-04-07       Impact factor: 4.116

10.  A single amino acid change within the R2 domain of the VvMYB5b transcription factor modulates affinity for protein partners and target promoters selectivity.

Authors:  Imène Hichri; Laurent Deluc; François Barrieu; Jochen Bogs; Ali Mahjoub; Farid Regad; Bernard Gallois; Thierry Granier; Claudine Trossat-Magnin; Eric Gomès; Virginie Lauvergeat
Journal:  BMC Plant Biol       Date:  2011-08-23       Impact factor: 4.215

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