Literature DB >> 23979312

Promoter analysis reveals cis-regulatory motifs associated with the expression of the WRKY transcription factor CrWRKY1 in Catharanthus roseus.

Zhirong Yang1,2, Barunava Patra3, Runzhi Li1, Sitakanta Pattanaik4, Ling Yuan5.   

Abstract

WRKY transcription factors (TFs) are emerging as an important group of regulators of plant secondary metabolism. However, the cis-regulatory elements associated with their regulation have not been well characterized. We have previously demonstrated that CrWRKY1, a member of subgroup III of the WRKY TF family, regulates biosynthesis of terpenoid indole alkaloids in the ornamental and medicinal plant, Catharanthus roseus. Here, we report the isolation and functional characterization of the CrWRKY1 promoter. In silico analysis of the promoter sequence reveals the presence of several potential TF binding motifs, indicating the involvement of additional TFs in the regulation of the TIA pathway. The CrWRKY1 promoter can drive the expression of a β-glucuronidase (GUS) reporter gene in native (C. roseus protoplasts and transgenic hairy roots) and heterologous (transgenic tobacco seedlings) systems. Analysis of 5'- or 3'-end deletions indicates that the sequence located between positions -140 to -93 bp and -3 to +113 bp, relative to the transcription start site, is critical for promoter activity. Mutation analysis shows that two overlapping as-1 elements and a CT-rich motif contribute significantly to promoter activity. The CrWRKY1 promoter is induced in response to methyl jasmonate (MJ) treatment and the promoter region between -230 and -93 bp contains a putative MJ-responsive element. The CrWRKY1 promoter can potentially be used as a tool to isolate novel TFs involved in the regulation of the TIA pathway.

Entities:  

Keywords:  Catharanthus roseus; Hairy roots; Terpenoid indole alkaloids; WRKY transcription factor

Mesh:

Substances:

Year:  2013        PMID: 23979312     DOI: 10.1007/s00425-013-1949-2

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  41 in total

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Authors:  Chang-Qing Yang; Xin Fang; Xiu-Ming Wu; Ying-Bo Mao; Ling-Jian Wang; Xiao-Ya Chen
Journal:  J Integr Plant Biol       Date:  2012-10       Impact factor: 7.061

Review 2.  Protein-protein interactions in the regulation of WRKY transcription factors.

Authors:  Yingjun Chi; Yan Yang; Yuan Zhou; Jie Zhou; Baofang Fan; Jing-Quan Yu; Zhixiang Chen
Journal:  Mol Plant       Date:  2013-03-02       Impact factor: 13.164

3.  A Catharanthus roseus BPF-1 homologue interacts with an elicitor-responsive region of the secondary metabolite biosynthetic gene Str and is induced by elicitor via a JA-independent signal transduction pathway.

Authors:  L van der Fits; H Zhang; F L Menke; M Deneka; J Memelink
Journal:  Plant Mol Biol       Date:  2000-11       Impact factor: 4.076

4.  Elicitor-responsive promoter regions in the tryptophan decarboxylase gene from Catharanthus roseus.

Authors:  P B Ouwerkerk; J Memelink
Journal:  Plant Mol Biol       Date:  1999-01       Impact factor: 4.076

5.  A promoter region that controls basal and elicitor-inducible expression levels of the NADPH:cytochrome P450 reductase gene (Cpr) from Catharanthus roseus binds nuclear factor GT-1.

Authors:  M I Cardoso; A H Meijer; S Rueb; J A Machado; J Memelink; J H Hoge
Journal:  Mol Gen Genet       Date:  1997-11

6.  Identification of a WRKY protein as a transcriptional regulator of benzylisoquinoline alkaloid biosynthesis in Coptis japonica.

Authors:  Nobuhiko Kato; Emilyn Dubouzet; Yasuhisa Kokabu; Sayumi Yoshida; Yoshimasa Taniguchi; Joseph Gogo Dubouzet; Kazufumi Yazaki; Fumihiko Sato
Journal:  Plant Cell Physiol       Date:  2006-11-27       Impact factor: 4.927

7.  Identification of a bipartite jasmonate-responsive promoter element in the Catharanthus roseus ORCA3 transcription factor gene that interacts specifically with AT-Hook DNA-binding proteins.

Authors:  Débora Vom Endt; Marina Soares e Silva; Jan W Kijne; Giancarlo Pasquali; Johan Memelink
Journal:  Plant Physiol       Date:  2007-05-11       Impact factor: 8.340

8.  Characterization of GaWRKY1, a cotton transcription factor that regulates the sesquiterpene synthase gene (+)-delta-cadinene synthase-A.

Authors:  Yan-Hua Xu; Jia-Wei Wang; Shui Wang; Jian-Ying Wang; Xiao-Ya Chen
Journal:  Plant Physiol       Date:  2004-05-07       Impact factor: 8.340

9.  The leaf epidermome of Catharanthus roseus reveals its biochemical specialization.

Authors:  Jun Murata; Jonathon Roepke; Heather Gordon; Vincenzo De Luca
Journal:  Plant Cell       Date:  2008-03-07       Impact factor: 11.277

10.  Isolation and functional analysis of the Catharanthus roseus deacetylvindoline-4-O-acetyltransferase gene promoter.

Authors:  Quan Wang; Fang Yuan; Qifang Pan; Meiya Li; Guofeng Wang; Jingya Zhao; Kexuan Tang
Journal:  Plant Cell Rep       Date:  2009-12-25       Impact factor: 4.570

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  9 in total

Review 1.  Regulation of specialized metabolism by WRKY transcription factors.

Authors:  Craig Schluttenhofer; Ling Yuan
Journal:  Plant Physiol       Date:  2014-12-10       Impact factor: 8.340

2.  Identification and Characterization of Transcription Factors Regulating Terpenoid Indole Alkaloid Biosynthesis in Catharanthus roseus.

Authors:  Sanjay K Singh; Barunava Patra; Joshua J Singleton; Yongliang Liu; Priyanka Paul; Xueyi Sui; Nitima Suttipanta; Sitakanta Pattanaik; Ling Yuan
Journal:  Methods Mol Biol       Date:  2022

3.  Synthetic introns help identify sequences in the 5' UTR intron of the Glycine max polyubiquitin (Gmubi) promoter that give increased promoter activity.

Authors:  Trudi N L Grant; Carola M De La Torre; Ning Zhang; John J Finer
Journal:  Planta       Date:  2017-01-09       Impact factor: 4.116

4.  De Novo Assembly and Characterization of the Transcriptome of the Chinese Medicinal Herb, Gentiana rigescens.

Authors:  Xiaodong Zhang; Andrew C Allan; Caixia Li; Yuanzhong Wang; Qiuyang Yao
Journal:  Int J Mol Sci       Date:  2015-05-20       Impact factor: 5.923

5.  Genome-wide Identification and Structural, Functional and Evolutionary Analysis of WRKY Components of Mulberry.

Authors:  Vinay Kumar Baranwal; Nisha Negi; Paramjit Khurana
Journal:  Sci Rep       Date:  2016-08-01       Impact factor: 4.379

6.  A Novel AP2/ERF Transcription Factor CR1 Regulates the Accumulation of Vindoline and Serpentine in Catharanthus roseus.

Authors:  Jiaqi Liu; Fangyuan Gao; Juansheng Ren; Xianjun Lu; Guangjun Ren; Rui Wang
Journal:  Front Plant Sci       Date:  2017-12-06       Impact factor: 5.753

7.  Differential expression of a WRKY gene between wild and cultivated soybeans correlates to seed size.

Authors:  Yongzhe Gu; Wei Li; Hongwei Jiang; Yan Wang; Huihui Gao; Miao Liu; Qingshan Chen; Yongcai Lai; Chaoying He
Journal:  J Exp Bot       Date:  2017-05-17       Impact factor: 6.992

Review 8.  bZIPs and WRKYs: two large transcription factor families executing two different functional strategies.

Authors:  Carles M Llorca; Maren Potschin; Ulrike Zentgraf
Journal:  Front Plant Sci       Date:  2014-04-30       Impact factor: 5.753

9.  The Ubiquitin-Conjugating Enzyme Gene Family in Longan (Dimocarpus longan Lour.): Genome-Wide Identification and Gene Expression during Flower Induction and Abiotic Stress Responses.

Authors:  Dengwei Jue; Xuelian Sang; Liqin Liu; Bo Shu; Yicheng Wang; Jianghui Xie; Chengming Liu; Shengyou Shi
Journal:  Molecules       Date:  2018-03-15       Impact factor: 4.411

  9 in total

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