Literature DB >> 18061589

Techniques for clustering gene expression data.

G Kerr1, H J Ruskin, M Crane, P Doolan.   

Abstract

Many clustering techniques have been proposed for the analysis of gene expression data obtained from microarray experiments. However, choice of suitable method(s) for a given experimental dataset is not straightforward. Common approaches do not translate well and fail to take account of the data profile. This review paper surveys state of the art applications which recognise these limitations and addresses them. As such, it provides a framework for the evaluation of clustering in gene expression analyses. The nature of microarray data is discussed briefly. Selected examples are presented for clustering methods considered.

Mesh:

Year:  2007        PMID: 18061589     DOI: 10.1016/j.compbiomed.2007.11.001

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


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