Literature DB >> 18057449

Developments in directed evolution for improving enzyme functions.

S Sen1, V Venkata Dasu, B Mandal.   

Abstract

The engineering of enzymes with altered activity, specificity, and stability, using directed evolution techniques that mimic evolution on a laboratory timescale, is now well established. In vitro recombination techniques such as DNA shuffling, staggered extension process (StEP), random chimeragenesis on transient templates (RACHITT), iterative truncation for the creation of hybrid enzymes (ITCHY), recombined extension on truncated templates (RETT), and so on have been developed to mimic and accelerate nature's recombination strategy. This review discusses gradual advances in the techniques and strategies used for the directed evolution of biocatalytic enzymes aimed at improving the quality and potential of enzyme libraries, their advantages, and disadvantages.

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Year:  2007        PMID: 18057449     DOI: 10.1007/s12010-007-8003-4

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   2.926


  20 in total

1.  Expression and function of a modified AP2/ERF transcription factor from Brassica napus enhances cold tolerance in transgenic Arabidopsis.

Authors:  Ai-Sheng Xiong; Hai-Hua Jiang; Jing Zhuang; Ri-He Peng; Xiao-Fen Jin; Bo Zhu; Feng Wang; Jian Zhang; Quan-Hong Yao
Journal:  Mol Biotechnol       Date:  2013-02       Impact factor: 2.695

2.  Highly L and D enantioselective variants of horseradish peroxidase discovered by an ultrahigh-throughput selection method.

Authors:  Eugene Antipov; Art E Cho; K Dane Wittrup; Alexander M Klibanov
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-12       Impact factor: 11.205

Review 3.  Potential of metabolic engineering in bacterial nanosilver synthesis.

Authors:  Sayak Mitra; Ashmita Das; Shampa Sen; Biswanath Mahanty
Journal:  World J Microbiol Biotechnol       Date:  2018-08-23       Impact factor: 3.312

4.  Restriction enzyme-free construction of random gene mutagenesis libraries in Escherichia coli.

Authors:  Jen C Pai; Kevin C Entzminger; Jennifer A Maynard
Journal:  Anal Biochem       Date:  2011-11-18       Impact factor: 3.365

Review 5.  Acidophilic bacteria and archaea: acid stable biocatalysts and their potential applications.

Authors:  Archana Sharma; Yutaka Kawarabayasi; T Satyanarayana
Journal:  Extremophiles       Date:  2011-11-13       Impact factor: 2.395

6.  Enzymes in food processing: a condensed overview on strategies for better biocatalysts.

Authors:  Pedro Fernandes
Journal:  Enzyme Res       Date:  2010-09-29

Review 7.  Evolution of efficient pathways for degradation of anthropogenic chemicals.

Authors:  Shelley D Copley
Journal:  Nat Chem Biol       Date:  2009-08       Impact factor: 15.040

8.  Improving low-temperature activity of Sulfolobus acidocaldarius 2-keto-3-deoxygluconate aldolase.

Authors:  Suzanne Wolterink-van Loo; Marco A J Siemerink; Georgios Perrakis; Thijs Kaper; Servé W M Kengen; John van der Oost
Journal:  Archaea       Date:  2009-03-02       Impact factor: 3.273

Review 9.  Using evolutionary computations to understand the design and evolution of gene and cell regulatory networks.

Authors:  Alexander Spirov; David Holloway
Journal:  Methods       Date:  2013-05-30       Impact factor: 3.608

10.  Synthesizing non-natural parts from natural genomic template.

Authors:  Pawan K Dhar; Chaw Su Thwin; Kyaw Tun; Yuko Tsumoto; Sebastian Maurer-Stroh; Frank Eisenhaber; Uttam Surana
Journal:  J Biol Eng       Date:  2009-02-03       Impact factor: 4.355

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