Literature DB >> 18055595

Evolution of acetoclastic methanogenesis in Methanosarcina via horizontal gene transfer from cellulolytic Clostridia.

Gregory P Fournier1, J Peter Gogarten.   

Abstract

Phylogenetic analysis confirmed that two genes required for acetoclastic methanogenesis, ackA and pta, were horizontally transferred to the ancestor of Methanosarcina from a derived cellulolytic organism in the class Clostridia. This event likely occurred within the last 475 million years, causing profound changes in planetary methane biogeochemistry.

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Year:  2007        PMID： 18055595      PMCID： PMC2223567          DOI： 10.1128/JB.01382-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  17 in total

1.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

2.  Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference.

Authors:  Gautam Altekar; Sandhya Dwarkadas; John P Huelsenbeck; Fredrik Ronquist
Journal:  Bioinformatics       Date:  2004-01-22       Impact factor: 6.937

3.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

4.  Highways of gene sharing in prokaryotes.

Authors:  Robert G Beiko; Timothy J Harlow; Mark A Ragan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-21       Impact factor: 11.205

5.  Kinetics of Acetate Utilization by Two Thermophilic Acetotrophic Methanogens: Methanosarcina sp. Strain CALS-1 and Methanothrix sp. Strain CALS-1.

Authors:  H Min; S H Zinder
Journal:  Appl Environ Microbiol       Date:  1989-02       Impact factor: 4.792

Review 6.  Biochemistry of methanogenesis: a tribute to Marjory Stephenson. 1998 Marjory Stephenson Prize Lecture.

Authors:  Rudolf K Thauer
Journal:  Microbiology (Reading)       Date:  1998-09       Impact factor: 2.777

Review 7.  Clostridium cellulolyticum: model organism of mesophilic cellulolytic clostridia.

Authors:  Mickaël Desvaux
Journal:  FEMS Microbiol Rev       Date:  2004-12-01       Impact factor: 16.408

Review 8.  Methane from acetate.

Authors:  J G Ferry
Journal:  J Bacteriol       Date:  1992-09       Impact factor: 3.490

9.  GenBank.

Authors:  Dennis A Benson; Ilene Karsch-Mizrachi; David J Lipman; James Ostell; David L Wheeler
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

10.  M-Coffee: combining multiple sequence alignment methods with T-Coffee.

Authors:  Iain M Wallace; Orla O'Sullivan; Desmond G Higgins; Cedric Notredame
Journal:  Nucleic Acids Res       Date:  2006-03-23       Impact factor: 16.971
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  36 in total

1.  The advantages and disadvantages of horizontal gene transfer and the emergence of the first species.

Authors:  Aaron A Vogan; Paul G Higgs
Journal:  Biol Direct       Date:  2011-01-03       Impact factor: 4.540

Review 2.  Horizontal gene transfer from extinct and extant lineages: biological innovation and the coral of life.

Authors:  Gregory P Fournier; Jinling Huang; J Peter Gogarten
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-08-12       Impact factor: 6.237

Review 3.  Horizontal gene transfer in evolution: facts and challenges.

Authors:  Luis Boto
Journal:  Proc Biol Sci       Date:  2009-10-28       Impact factor: 5.349

Review 4.  Biased gene transfer in microbial evolution.

Authors:  Cheryl P Andam; J Peter Gogarten
Journal:  Nat Rev Microbiol       Date:  2011-06-13       Impact factor: 60.633

5.  Identification of Xenologs and Their Characteristic Low Expression Levels in the Cyanobacterium Synechococcus elongatus.

Authors:  Gilberto Álvarez-Canales; Guadalupe Arellano-Álvarez; Carmen M González-Domenech; Fernando de la Cruz; Andrés Moya; Luis Delaye
Journal:  J Mol Evol       Date:  2015-06-04       Impact factor: 2.395

6.  Methanogenesis on Early Stages of Life: Ancient but Not Primordial.

Authors:  Israel Muñoz-Velasco; Carlos García-Ferris; Ricardo Hernandez-Morales; Antonio Lazcano; Juli Peretó; Arturo Becerra
Journal:  Orig Life Evol Biosph       Date:  2019-01-05       Impact factor: 1.950

7.  Molecular characterization of the thioredoxin system from Methanosarcina acetivorans.

Authors:  Addison C McCarver; Daniel J Lessner
Journal:  FEBS J       Date:  2014-09-06       Impact factor: 5.542

8.  Methanogenic burst in the end-Permian carbon cycle.

Authors:  Daniel H Rothman; Gregory P Fournier; Katherine L French; Eric J Alm; Edward A Boyle; Changqun Cao; Roger E Summons
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-31       Impact factor: 11.205

9.  Molecular Evidence for an Active Microbial Methane Cycle in Subsurface Serpentinite-Hosted Groundwaters in the Samail Ophiolite, Oman.

Authors:  Emily A Kraus; Daniel Nothaft; Blake W Stamps; Kaitlin R Rempfert; Eric T Ellison; Juerg M Matter; Alexis S Templeton; Eric S Boyd; John R Spear
Journal:  Appl Environ Microbiol       Date:  2021-01-04       Impact factor: 4.792

10.  Lateral transfer of genes and gene fragments in prokaryotes.

Authors:  Cheong Xin Chan; Robert G Beiko; Aaron E Darling; Mark A Ragan
Journal:  Genome Biol Evol       Date:  2009-11-04       Impact factor: 3.416
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