| Literature DB >> 18053221 |
Maria Nilsson1, Ingrid Dahlman, Hong Jiao, Jan-Ake Gustafsson, Peter Arner, Karin Dahlman-Wright.
Abstract
BACKGROUND: The estrogen receptors alpha and beta (ESR1, ESR2) have been implicated in adiposity, lipid metabolism and feeding behaviour. In this report we analyse ESR1 and ESR2 gene single nucleotide polymorphisms (SNPs) for association with obesity. We also relate adipose tissue ESR1 mRNA levels and ESR1 SNPs to adipocyte lipolysis and lipogenesis phenotypes.Entities:
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Year: 2007 PMID: 18053221 PMCID: PMC2238734 DOI: 10.1186/1471-2350-8-73
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Sample phenotypic distributions
| Name Phenotype | Sample 1 Obesity | Sample 2 Obesity replication | Sample 3a Fat cells | ||
| Obese | Women (N = 581) | Men (N = 124) | Women (N = 689) | Men (N = 148) | Women (N = 216) |
| Age (years) | 41 ± 12 | 45 ± 13 | 43 ± 11 | 45 ± 12 | 38 ± 10 |
| BMI (kg/m2) | 43 ± 5 | 45 ± 5 | 37 ± 5 | 45 ± 5 | 38 ± 5 |
| HOMAIR | 5.3 ± 5.7 | 10.5 ± 16.5 | 4.5 ± 5.7 | 8.2 ± 5.5 | 3.8 ± 2.8 |
| Pl-cholesterol (mmol/l) | 5.2 ± 1. | 5.2 ± 1.2 | 5.3 ± 1.1 | 5.2 ± 1.1 | 5.2 ± 1.1 |
| Pl-HDL cholesterol (mmol/l) | 1.2 ± 0.3 | 1.0 ± 0.2 | 1.3 ± 0.3 | 1.1 ± 0.3 | 1.2 ± 0.3 |
| Pl-triglycerides (mmol/l) | 1.7 ± 0.9 | 2.3 ± 2.3 | 1.7 ± 1.0 | 2.0 ± 1.2 | 1.6 ± 1.0 |
| Lean | Women (N = 338) | Men (N = 64) | Women (N = 525) | Men (N = 88) | Women (N = 12) |
| Age (years) | 50 ± 4 | 57 ± 8 | 39 ± 6 | 36 ± 11 | 33 ± 8 |
| BMI (kg/m2) | 22 ± 2 | 23 ± 2 | 22 ± 3 | 23 ± 1 | 22 ± 2 |
| HOMAIR | 1.3 ± 0.7 | 1.6 ± 0.8 | 1.3 ± 1.0 | 1.4 ± 0.7 | 1.4 ± 0.9 |
| Pl-cholesterol (mmol/l) | 5.4 ± 1.0 | 5.7 ± 1.1 | 4.7 ± 0.8 | 4.9 ± 1.1 | 4.8 ± 0.7 |
| Pl-HDL cholesterol (mmol/l) | 1.7 ± 0.4 | 1.4 ± 0.4 | 1.6 ± 0.4 | 1.3 ± 0.5 | 1.6 ± 0.4 |
| Pl-triglycerides (mmol/l) | 0.9 ± 0.5 | 1.5 ± 1.0 | 0.9 ± 0.5 | 1.3 ± 1.4 | 0.8 ± 0.2 |
Values are mean ± SD
a) 99 subjects overlap between sample 1 and 3.
Genotyped ESR1 and ESR2 SNPs
| Marker | Gene position | Chromosome position | Alleles | Common allele (%) | Call rate (%) | Chi2 of HWE |
| rs488133 | 5' | 152217558 | C > T | 68 | 98 | 0.45 |
| rs532010 | 5' | 152223032 | A > G | 65 | 98 | 0.95 |
| rs11155813 | intron 1 | 152241549 | T > C | 88 | 96 | 0.06 |
| rs1709182 | intron 2 | 152267471 | T > C | 66 | 96 | 0.81 |
| rs1709183 | intron 2 | 152286110 | T > C | 72 | 98 | 0.4 |
| rs9340835 | intron 2 | 152292045 | G > A | 68 | 98 | 0.06 |
| rs6557170 | intron 3 | 152295218 | G > A | 79 | 95 | 0.97 |
| rs2347867 | intron 3 | 152321964 | A > G | 68 | 98 | 0.17 |
| rs9397456 | intron 3 | 152339266 | G > A | 80 | 98 | 0.15 |
| rs12154178 | intron 3 | 152343194 | A > C | 72 | 98 | 0.59 |
| rs3020317 | intron 4 | 152370855 | T > C | 82 | 98 | 0.03 |
| rs1884051 | intron 4 | 152375393 | A > G | 71 | 98 | 0 |
| rs1884054 | intron 4 | 152383680 | A > C | 67 | 98 | 0.47 |
| rs7754762 | intron 4 | 152403651 | T > A | 87 | 97 | 1.61 |
| rs7757956 | intron 4 | 152409254 | T > A | 86 | 98 | 2.69 |
| rs9340954 | intron 4 | 152412286 | T > G | 70 | 98 | 2.89 |
| rs3020368 | intron 5 | 152463304 | C > T | 91 | 97 | 0.05 |
| rs3778082 | intron 6 | 152479778 | G > A | 86 | 95 | 1.76 |
| rs2982896 | intron 6 | 152491607 | C > T | 77 | 97 | 0.01 |
| rs3020383 | intron 7 | 152508893 | G > C | 92 | 97 | 0.28 |
| rs3778099 | intron 7 | 152510689 | T > C | 87 | 97 | 1.18 |
| rs2813544 | 3' | 152517696 | A > G | 79 | 98 | 0.88 |
| rs1543403 | 3' | 152520818 | G > C | 52 | 96 | 1.48 |
| rs3020450 | 5' | 63838055 | C > T | 70 | 93 | 6.29a |
| rs1271572 | 5' | 63831670 | C > A | 54 | 98 | 1.03 |
| rs1887994 | intron 1 | 63830364 | C > A | 89 | 97 | 0.28 |
| rs7159462 | intron 1 | 63828629 | C > T | 92 | 97 | 0.14 |
| rs1269056 | intron 3 | 63813643 | C > T | 56 | 97 | 1.3 |
| rs7154455 | intron 3 | 63806413 | G > C | 64 | 83 | 0.23 |
| rs1256061 | intron 7 | 63773346 | G > T | 50 | 97 | 1.89 |
| rs1256063 | intron 7 | 63771970 | G > A | 91 | 94 | 0.27 |
| rs4986938 | 3' | 63769569 | G > A | 62 | 100 | 0.56 |
| rs928554 | 3' | 63763948 | A > G | 56 | 100 | 2.8 |
| rs1152582 | 3' | 63762383 | C > G | 56 | 98 | 0.71 |
a) HWE among controls n.s.
Figure 1LD (D') between ESR1 SNP and haploblocks according to Caucasian HAPMAP data.
Figure 2LD (D') between ESR2 SNP and haploblocks according to Caucasian HAPMAP data.
Association of ESR1 and ESR2 haplotypes with obesity
| Cases | Controls | |||||
| Haploblock | % | Specific haplotype (n) | Other (n) | Specific haplotype (n) | Other (n) | P value |
| rs488133-rs532010-rs11155813 | ||||||
| CGT | 34 | 449 | 917 | 288 | 508 | 0.12 |
| TAT | 33 | 455 | 911 | 250 | 546 | 0.37 |
| CAT | 21 | 285 | 1081 | 167 | 629 | 0.96 |
| CAC | 11 | 158 | 1208 | 82 | 714 | 0.36 |
| rs1709182 | ||||||
| T | 67 | 925 | 441 | 516 | 282 | 0.14 |
| C | 33 | 441 | 925 | 282 | 516 | 0.14 |
| rs6557170-rs2347867 | ||||||
| GA | 68 | 916 | 450 | 549 | 249 | 0.40 |
| AG | 21 | 299 | 1067 | 165 | 633 | 0.52 |
| GG | 11 | 151 | 1215 | 84 | 714 | 0.68 |
| rs12154178 | ||||||
| A | 18 | 976 | 390 | 575 | 223 | 0.76 |
| C | 28 | 390 | 976 | 223 | 575 | 0.76 |
| rs3020317 | ||||||
| T | 82 | 1116 | 250 | 652 | 146 | 1.00 |
| C | 18 | 250 | 1116 | 146 | 652 | 1.00 |
| rs1884054 | ||||||
| A | 67 | 920 | 446 | 531 | 267 | 0.70 |
| C | 33 | 446 | 920 | 267 | 531 | 0.70 |
| rs7754762-rs7757956-rs9340954-rs3020368 | ||||||
| TTTC | 69 | 947 | 420 | 557 | 239 | 0.75 |
| ATGC | 13 | 185 | 1181 | 99 | 697 | 0.47 |
| TAGT | 8 | 113 | 1253 | 69 | 727 | 0.77 |
| TAGC | 5 | 67 | 1299 | 43 | 753 | 0.59 |
| rs3778082-rs2982896 | ||||||
| GC | 63 | 862 | 502 | 502 | 296 | 0.90 |
| GT | 23 | 310 | 1054 | 197 | 601 | 0.30 |
| AC | 14 | 192 | 1172 | 99 | 699 | 0.27 |
| rs2813544-rs1543403 | ||||||
| AC | 48 | 640 | 727 | 396 | 402 | 0.21 |
| AG | 31 | 419 | 948 | 248 | 550 | 0.82 |
| GG | 21 | 301 | 1065 | 152 | 646 | 0.10 |
| rs3020450-rs1271572-rs1887994-rs7159462 | ||||||
| CACC | 46 | 639 | 727 | 346 | 452 | 0.12 |
| TCCC | 29 | 372 | 994 | 254 | 544 | 0.024* |
| CCAC | 11 | 153 | 1213 | 79 | 719 | 0.33 |
| CCCT | 8 | 116 | 1251 | 65 | 733 | 0.83 |
| CCCC | 6 | 81 | 1285 | 49 | 749 | 0.86 |
| rs1256061-rs1256063 | ||||||
| TG | 50 | 671 | 689 | 401 | 397 | 0.68 |
| GG | 41 | 547 | 814 | 331 | 467 | 0.57 |
| GA | 10 | 142 | 1218 | 66 | 732 | 0.10 |
| rs4986938-rs928554-rs1152582 | ||||||
| GGG | 44 | 619 | 747 | 333 | 465 | 0.10 |
| AAC | 38 | 502 | 864 | 310 | 488 | 0.32 |
| GAC | 18 | 233 | 1133 | 149 | 649 | 0.35 |
Association between ESR SNPs and obesity in samples 1 and 2a
| Gene | SNP | Controls (n) | Cases (n) | Allele Frequency | Heterozygous | Homozygous | Recessive model | Armitage's trend test | |||||||||
| 22b | 21 | 11 | 22 | 21 | 11 | [2]<-> [1]c | P value | [22]<-> [12] | P value | [22]<-> [11] | P value | [11+12]<-> [22] | P value | OR | P value | ||
| Sample 1 | |||||||||||||||||
| rs2813544 | 10 | 134 | 255 | 33 | 242 | 408 | 0.82 [0.66–1.02] | 0,08 | 0.55 [0.26–1.14] | 0,11 | 0.48 [0.24–1.00] | 0.51 [0.25–1.04] | 0,06 | 0,79 | 0,07 | ||
| Women | 8 | 114 | 213 | 29 | 194 | 339 | 0.83 [0.66–1.06] | 0,13 | 0.47 [0.21–1.06] | 0,06 | 0.44 [0.20–0.98] | 0.45 [0.20–1.00] | 0,79 | 0,13 | |||
| Men | 2 | 20 | 42 | 4 | 48 | 69 | 0.77 [0.45–1.31] | 0,33 | 1.20 [0.20–7.08] | 0,84 | 0.82 [0.14–4.68] | 0,82 | 0.94 [0.17–5.30] | 0,95 | 0,78 | 0,31 | |
| rs7154455 | 107 | 167 | 47 | 273 | 260 | 62 | 0.70 [0.57–0.85] | 0.61 [0.45–0.82] | 0.52 [0.33–0.80] | 0.59 [0.44–0.78] | 0,7 | ||||||
| Women | 84 | 144 | 43 | 223 | 219 | 45 | 0.63 [0.51–0.78] | 0.57 [0.41–0.80] | 0.39 [0.24–0.64] | 0.53 [0.39–0.73] | 0,62 | ||||||
| Men | 23 | 23 | 4 | 50 | 41 | 17 | 1.18 [0.71–1.97] | 0,51 | 0.82 [0.40–1.67] | 0,58 | 2.0 [0.59–6.46] | 0,27 | 0.99 [0.50–1.94] | 0,97 | 1,26 | 0,53 | |
| rs3020450 | 177 | 163 | 44 | 353 | 237 | 59 | 0.78 [0.64–0.94] | 0.73 [0.56–0.95] | 0.67 [0.44–1.03] | 0,07 | 0.72 [0.56–0.92] | 0,8 | |||||
| Women | 147 | 139 | 41 | 288 | 202 | 42 | 0.72 [0.58–0.89] | 0.74 [0.55–1.00] | 0.52 [0.33–0.84] | 0.69 [0.52–0.91] | 0,73 | ||||||
| Men | 30 | 24 | 3 | 65 | 35 | 17 | 1.17 [0.71–1.94] | 0,54 | 0.67 [0.34–1.32] | 0,25 | 2.61 [0.71–9.61] | 0,14 | 0.89 [0.47–1.68] | 0,72 | 1,32 | 0,57 | |
| Women | |||||||||||||||||
| rs1152582 | 54 | 171 | 110 | 127 | 274 | 161 | 0.80 [0.66–0.98] | 0.68 [0.47–1.00] | 0.62 [0.42–0.93] | 0.66 [0.46–0.94] | 0,8 | ||||||
| rs1271572 | 59 | 172 | 104 | 130 | 281 | 151 | 0.82 [0.68–1.00] | 0.74 [0.52–1.06] | 0,1 | 0.66 [0.44–1.00] | 0.71 [0.50–1.00] | 0,82 | |||||
| rs1269056 | 53 | 175 | 107 | 127 | 275 | 158 | 0.81 [0.66–0.98] | 0.66 [0.45–0.95] | 0.62 [0.41–0.92] | 0.64 [0.45–0.91] | 0,8 | ||||||
| Men | |||||||||||||||||
| rs4986938 | 4 | 30 | 30 | 20 | 59 | 45 | 0.64 [0.40–1.00] | 0.39 [0.12–1.26] | 0,11 | 0.30 [0.09–0.96] | 0.35 [0.11–1.06] | 0,6 | |||||
| Sample 2 | |||||||||||||||||
| rs3020450 | 326 | 245 | 41 | 410 | 332 | 60 | 1.08 [0.91–1.27] | 0,39 | 1.08 [0.86–1.34] | 0,51 | 1.16 [0.76–1.78] | 0,48 | 1.09 [0.88–1.34] | 0,42 | 1.08 | 0,38 | |
| Women | 273 | 216 | 35 | 346 | 282 | 53 | 1.06 [0.89–1.27] | 0,42 | 1.03 [0.81–1.31] | 0,81 | 1.20 [0.76–1.88] | 0,44 | 1.05 [0.84–1.32] | 0,65 | 1.07 | 0,51 | |
| Men | 53 | 29 | 6 | 64 | 50 | 7 | 1.18 [0.75–1.86] | 0,46 | 1.42 [0.80–2.56] | 0,23 | 0.97 [0.31–3.05] | 0,95 | 1.35 [0.77–2.35] | 0,29 | 1.11 | 0,46 | |
| rs7154455 | 318 | 248 | 46 | 399 | 341 | 63 | 1.06 [0.90–1.26] | 0,45 | 1.10 [0.88–1.37] | 0,42 | 1.09 [0.73–1.64] | 0,67 | 1.09 [0.89–1.35] | 0,40 | 1.06 | 0,44 | |
| Women | 268 | 216 | 40 | 337 | 287 | 57 | 1.06 [0.89–1.27] | 0,52 | 1.06 [0.83–1.34] | 0,65 | 1.13 [0.73–1.75] | 0,57 | 1.07 [0.85–1.34] | 0,57 | 1.06 | 0,52 | |
| Men | 50 | 32 | 6 | 62 | 54 | 6 | 1.11 [0.71–1.73] | 0,64 | 1.36 [0.77–2.42] | 0,29 | 0.81 [0.24–2.65] | 0,72 | 1.27 [0.73–2.21] | 0,74 | 1.05 | 0,63 | |
a) Shown are SNPs with P value < 0.05 in at least one analysis.
b) 1 and 2 represent the two alleles of each SNP.
c) OR (95% confidence interval)
Figure 3ESR1 mRNA levels in abdominal sc adipose tissue plotted against (A) basal lipolysis, response to (B) noradrenaline, (C) the non-selective β-adrenoceptor agonist isoprenaline, and (D) the α2-adrenoceptor selective agonist clonidine.
Regression of basal lipolysis and responsiveness to adrenoceptor agonist on ERS1 mRNA levels
| Coefficient ± SE | Std. Coeff. | T-value | P value | |
| Basal lipolysis | ||||
| Intercept | 2.34 ± 4.54 | 2.34 | 0.51 | 0.61 |
| -3.90 ± 1.62 | -0.20 | -2.40 | 0.018 | |
| BMI (kg/m2) | 0.44 ± 0.10 | 0.39 | 4.61 | <0.0001 |
| Age (years) | -0.14 ± 0.08 | -0.15 | -1.86 | .065 |
| Response to noradrenaline | ||||
| Intercept | 13.84 ± 6.40 | 13.84 | 2.16 | .033 |
| -5.72 ± 2.26 | -0.21 | -2.53 | .013 | |
| BMI (kg/m2) | 0.58 ± 0.13 | 0.37 | 4.38 | <0.0001 |
| Age (years) | -0.22 ± 0.11 | -.174 | -2.12 | .036 |
| Response to isoprenaline | ||||
| Intercept | 15.44 ± 8.72 | 15.44 | 1.77 | 0.079 |
| -6.31 ± 3.11 | -0.18 | -2.03 | 0.045 | |
| BMI (kg/m2) | 0.78 ± 0.18 | 0.37 | 4.28 | <.0001 |
| Age (years) | -0.16 ± 0.14 | -0.10 | -1.14 | 0.26 |
| Response to clonidine | ||||
| Intercept | 0.99 ± 0.92 | 0.99 | 1.08 | 0.28 |
| -0.87 ± 0.33 | -0.23 | -2.65 | 0.0091 | |
| BMI (kg/m2) | 0.07 ± 0.02 | 0.31 | 3.57 | 0.0005 |
| Age (years) | -0.02 ± 0.02 | -0.08 | -1.00 | 0.32 |
Association between ESR1 SNPs and lipolysis and lipogenesis phenotypesa
| Source | Sum of Squares | F Ratio | Prob > F | |
| Noradrenaline pD2, lipolysis b | ||||
| rs532010 | 0.045 | 4.51 | 0.012 | |
| Response to Isoprenaline, lipolysis c | ||||
| rs1884051 | 0.219 | 3.02 | 0.050 | |
a) For quantitative analysis of lipolysis and lipogenesis, logarithm transformed phenotypes were used as independent quantitative variables in linear regression models. Genotypes were indicated as character (nominal) with three levels, two alternative homozygous and heterozygous.
b) The concentration (log mol/l) of hormone or agonist causing half maximum effect was determined using logistic conversion of each concentration response curve. This value was converted to its negative form (pD2), which reflects hormone sensitivity.
c) Lipolysis is expressed as mmol of glycerol/2 h/107 cells.