Literature DB >> 18052062

A single residue switch converts abietadiene synthase into a pimaradiene specific cyclase.

P Ross Wilderman1, Reuben J Peters.   

Abstract

Terpene synthases often catalyze complex cyclization reactions that typically represent the committed step in particular biosynthetic pathways, leading to great interest in their enzymatic mechanisms. We have recently demonstrated that substitution of a specific Ile with Thr was sufficient to "short circuit" the complex cyclization reaction normally catalyzed by ent-kaurene synthases to instead produce ent-pimaradiene. Here we report that the complex cyclization/rearrangement reaction catalyzed by abietadiene synthase can be similarly cut short to produce pimaradienes by an analogous Ser for Ala change, albeit with a slight shift in active site location to accommodate the difference in substrate stereochemistry. This result has mechanistic implications for enzymatic catalysis of abietadiene cyclization, and terpene synthases more broadly. Furthermore, these defined single residue switches may be useful in engineering product outcome in diterpene synthases more generally.

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Year:  2007        PMID: 18052062      PMCID: PMC2525807          DOI: 10.1021/ja074977g

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  13 in total

1.  Engineering cotton (+)-delta-cadinene synthase to an altered function: germacrene D-4-ol synthase.

Authors:  Yasuo Yoshikuni; Vincent J J Martin; Thomas E Ferrin; Jay D Keasling
Journal:  Chem Biol       Date:  2006-01

2.  Designed divergent evolution of enzyme function.

Authors:  Yasuo Yoshikuni; Thomas E Ferrin; Jay D Keasling
Journal:  Nature       Date:  2006-02-22       Impact factor: 49.962

3.  Abietadiene synthase catalysis: mutational analysis of a prenyl diphosphate ionization-initiated cyclization and rearrangement.

Authors:  Reuben J Peters; Rodney B Croteau
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

4.  Bifunctional abietadiene synthase: free diffusive transfer of the (+)-copalyl diphosphate intermediate between two distinct active sites.

Authors:  R J Peters; M M Ravn; R M Coates; R B Croteau
Journal:  J Am Chem Soc       Date:  2001-09-19       Impact factor: 15.419

5.  Abietadiene synthase from grand fir (Abies grandis): characterization and mechanism of action of the "pseudomature" recombinant enzyme.

Authors:  R J Peters; J E Flory; R Jetter; M M Ravn; H J Lee; R M Coates; R B Croteau
Journal:  Biochemistry       Date:  2000-12-19       Impact factor: 3.162

6.  The variability of sesquiterpenes emitted from two Zea mays cultivars is controlled by allelic variation of two terpene synthase genes encoding stereoselective multiple product enzymes.

Authors:  Tobias G Köllner; Christiane Schnee; Jonathan Gershenzon; Jörg Degenhardt
Journal:  Plant Cell       Date:  2004-04-09       Impact factor: 11.277

7.  Functional characterization of nine Norway Spruce TPS genes and evolution of gymnosperm terpene synthases of the TPS-d subfamily.

Authors:  Diane M Martin; Jenny Fäldt; Jörg Bohlmann
Journal:  Plant Physiol       Date:  2004-08-13       Impact factor: 8.340

8.  16-Aza-ent-beyerane and 16-Aza-ent-trachylobane: potent mechanism-based inhibitors of recombinant ent-kaurene synthase from Arabidopsis thaliana.

Authors:  Arnab Roy; Frank G Roberts; P Ross Wilderman; Ke Zhou; Reuben J Peters; Robert M Coates
Journal:  J Am Chem Soc       Date:  2007-09-25       Impact factor: 15.419

9.  Diterpenoid resin acid biosynthesis in conifers: enzymatic cyclization of geranylgeranyl pyrophosphate to abietadiene, the precursor of abietic acid.

Authors:  R E LaFever; B S Vogel; R Croteau
Journal:  Arch Biochem Biophys       Date:  1994-08-15       Impact factor: 4.013

10.  Mechanism of abietadiene synthase catalysis: stereochemistry and stabilization of the cryptic pimarenyl carbocation intermediates.

Authors:  Matthew M Ravn; Reuben J Peters; Robert M Coates; Rodney Croteau
Journal:  J Am Chem Soc       Date:  2002-06-19       Impact factor: 15.419

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  36 in total

1.  Probing Enzymatic Structure and Function in the Dihydroxylating Sesquiterpene Synthase ZmEDS.

Authors:  Jin Liang; Liping Wang; Jiang Liu; Qinqin Shen; Jingye Fu; Reuben J Peters; Qiang Wang
Journal:  Biochemistry       Date:  2020-06-28       Impact factor: 3.162

Review 2.  Protein engineering towards natural product synthesis and diversification.

Authors:  Angelica O Zabala; Ralph A Cacho; Yi Tang
Journal:  J Ind Microbiol Biotechnol       Date:  2011-10-18       Impact factor: 3.346

Review 3.  Two rings in them all: the labdane-related diterpenoids.

Authors:  Reuben J Peters
Journal:  Nat Prod Rep       Date:  2010-10-01       Impact factor: 13.423

4.  Identification of a fungal 1,8-cineole synthase from Hypoxylon sp. with specificity determinants in common with the plant synthases.

Authors:  Jeffrey J Shaw; Tetyana Berbasova; Tomoaki Sasaki; Kyra Jefferson-George; Daniel J Spakowicz; Brian F Dunican; Carolina E Portero; Alexandra Narváez-Trujillo; Scott A Strobel
Journal:  J Biol Chem       Date:  2015-02-03       Impact factor: 5.157

5.  Insights into diterpene cyclization from structure of bifunctional abietadiene synthase from Abies grandis.

Authors:  Ke Zhou; Yang Gao; Julie A Hoy; Francis M Mann; Richard B Honzatko; Reuben J Peters
Journal:  J Biol Chem       Date:  2012-01-04       Impact factor: 5.157

Review 6.  Enzyme (re)design: lessons from natural evolution and computation.

Authors:  John A Gerlt; Patricia C Babbitt
Journal:  Curr Opin Chem Biol       Date:  2009-02-23       Impact factor: 8.822

7.  Biochemical characterization of the castor bean ent-kaurene synthase(-like) family supports quantum chemical view of diterpene cyclization.

Authors:  Alana J Jackson; David M Hershey; Taylor Chesnut; Meimei Xu; Reuben J Peters
Journal:  Phytochemistry       Date:  2014-05-05       Impact factor: 4.072

8.  Increasing diterpene yield with a modular metabolic engineering system in E. coli: comparison of MEV and MEP isoprenoid precursor pathway engineering.

Authors:  Dana Morrone; Luke Lowry; Mara K Determan; David M Hershey; Meimei Xu; Reuben J Peters
Journal:  Appl Microbiol Biotechnol       Date:  2009-09-24       Impact factor: 4.813

Review 9.  Terpenoid synthase structures: a so far incomplete view of complex catalysis.

Authors:  Yang Gao; Richard B Honzatko; Reuben J Peters
Journal:  Nat Prod Rep       Date:  2012-08-21       Impact factor: 13.423

10.  Gene discovery of modular diterpene metabolism in nonmodel systems.

Authors:  Philipp Zerbe; Björn Hamberger; Macaire M S Yuen; Angela Chiang; Harpreet K Sandhu; Lina L Madilao; Anh Nguyen; Britta Hamberger; Søren Spanner Bach; Jörg Bohlmann
Journal:  Plant Physiol       Date:  2013-04-23       Impact factor: 8.340

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