Literature DB >> 18051116

Contributions to 3D diffeomorphic atlas estimation: application to brain images.

Matias Bossa1, Monica Hernandez, Salvador Olmos.   

Abstract

This paper focuses on the estimation of statistical atlases of 3D images by means of diffeomorphic transformations. Within a Log-Euclidean framework, the exponential and logarithm maps of diffeomorphisms need to be computed. In this framework, the Inverse Scaling and Squaring (ISS) method has been recently extended for the computation of the logarithm map, which is one of the most time demanding stages. In this work we propose to apply the Baker-Campbell-Hausdorff (BCH) formula instead. In a 3D simulation study, BCH formula and ISS method obtained similar accuracy but BCH formula was more than 100 times faster. This approach allowed us to estimate a 3D statistical brain atlas in a reasonable time, including the average and the modes of variation. Details for the computation of the modes of variation in the Sobolev tangent space of diffeomorphisms are also provided.

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Year:  2007        PMID: 18051116     DOI: 10.1007/978-3-540-75757-3_81

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  8 in total

Review 1.  Deformable medical image registration: a survey.

Authors:  Aristeidis Sotiras; Christos Davatzikos; Nikos Paragios
Journal:  IEEE Trans Med Imaging       Date:  2013-05-31       Impact factor: 10.048

2.  Stopping Criteria for Log-Domain Diffeomorphic Demons Registration: An Experimental Survey for Radiotherapy Application.

Authors:  M Peroni; P Golland; G C Sharp; G Baroni
Journal:  Technol Cancer Res Treat       Date:  2014-12-02

3.  Variations in the shape of the frontobasal brain region in obsessive-compulsive disorder.

Authors:  Jesus Pujol; Carles Soriano-Mas; Juan D Gispert; Matías Bossa; Santiago Reig; Hector Ortiz; Pino Alonso; Narcís Cardoner; Marina López-Solà; Ben J Harrison; Joan Deus; José M Menchón; Manuel Desco; Salvador Olmos
Journal:  Hum Brain Mapp       Date:  2010-07-06       Impact factor: 5.038

4.  Towards Effcient Label Fusion by Pre-Alignment of Training Data.

Authors:  Michal Depa; Godtfred Holmvang; Ehud J Schmidt; Polina Golland; Mert R Sabuncu
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

5.  A diffeomorphic aging model for adult human brain from cross-sectional data.

Authors:  Alphin J Thottupattu; Jayanthi Sivaswamy; Venkateswaran P Krishnan
Journal:  Sci Rep       Date:  2022-07-25       Impact factor: 4.996

6.  Longitudinal Analysis of Image Time Series with Diffeomorphic Deformations: A Computational Framework Based on Stationary Velocity Fields.

Authors:  Mehdi Hadj-Hamou; Marco Lorenzi; Nicholas Ayache; Xavier Pennec
Journal:  Front Neurosci       Date:  2016-06-03       Impact factor: 4.677

Review 7.  Whole Brain Magnetic Resonance Image Atlases: A Systematic Review of Existing Atlases and Caveats for Use in Population Imaging.

Authors:  David Alexander Dickie; Susan D Shenkin; Devasuda Anblagan; Juyoung Lee; Manuel Blesa Cabez; David Rodriguez; James P Boardman; Adam Waldman; Dominic E Job; Joanna M Wardlaw
Journal:  Front Neuroinform       Date:  2017-01-19       Impact factor: 4.081

8.  Regional brain development analysis through registration using anisotropic similarity, a constrained affine transformation.

Authors:  Antoine Legouhy; Olivier Commowick; Maïa Proisy; François Rousseau; Christian Barillot
Journal:  PLoS One       Date:  2020-02-24       Impact factor: 3.240

  8 in total

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