Literature DB >> 18048720

Rhodococcus qingshengii sp. nov., a carbendazim-degrading bacterium.

Jing-Liang Xu1, Jian He1, Zhi-Chun Wang1, Kun Wang1, Wen-Jun Li2, Shu-Kun Tang2, Shun-Peng Li1.   

Abstract

A Gram-positive, aerobic, non-motile, mesophilic strain, djl-6(T), able to degrade carbendazim, was isolated from a carbendazim-contaminated soil sample from Jiangsu province, China. The taxonomic position of this isolate was analysed by using a polyphasic approach. Chemotaxonomic analysis including peptidoglycan type, diagnostic sugar composition, fatty acid profile, menaquinones, polar lipids and mycolic acids showed that the characteristics of strain djl-6(T) were in good agreement with those of the genus Rhodococcus. DNA-DNA hybridization showed that it had low genomic relatedness with Rhodococcus baikonurensis DSM 44587(T) (31.8 %), Rhodococcus erythropolis DSM 43066(T) (23.8 %) and Rhodococcus globerulus DSM 43954(T) (17.7 %), the three type strains to which strain djl-6(T) was most closely related based on 16S rRNA gene sequence analysis (99.78, 99.25 and 98.91 % similarity, respectively). Based on the phenotypic properties and DNA-DNA hybridization data, strain djl-6(T) (=CGMCC 1.6580(T) =KCTC 19205(T)) is proposed as the type strain of a novel Rhodococcus species, Rhodococcus qingshengii sp. nov.

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Year:  2007        PMID: 18048720     DOI: 10.1099/ijs.0.65095-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  19 in total

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Journal:  Arch Microbiol       Date:  2020-10-06       Impact factor: 2.552

10.  Benchmarking DNA Extraction Methods for Phylogenomic Analysis of Sub-Antarctic Rhodococcus and Williamsia Species.

Authors:  Akhikun Nahar; Anthony L Baker; David S Nichols; John P Bowman; Margaret L Britz
Journal:  Microorganisms       Date:  2021-06-09
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