Literature DB >> 18047533

Modeling time series of animal behavior by means of a latent-state model with feedback.

Walter Zucchini1, David Raubenheimer2, Iain L MacDonald3.   

Abstract

We describe a family of models developed for time series of animal feeding behavior. The models incorporate both an unobserved state, which can be interpreted as the motivational state of the animal, and a mechanism for feedback to this state from the observed behavior. We discuss methods for evaluating and maximizing the likelihood of an observed series of behaviors, and thereby estimating parameters, and for inferring the most likely sequence of underlying states. We indicate several extensions of the models, including the incorporation of random effects. We apply these methods in an analysis of the feeding behavior of the caterpillar Helicoverpa armigera, and thereby demonstrate the potential of this family of models as a tool in the investigation of behavior.

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Mesh:

Year:  2007        PMID: 18047533     DOI: 10.1111/j.1541-0420.2007.00939.x

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  9 in total

1.  Predicting the effects of human developments on individual dolphins to understand potential long-term population consequences.

Authors:  Enrico Pirotta; John Harwood; Paul M Thompson; Leslie New; Barbara Cheney; Monica Arso; Philip S Hammond; Carl Donovan; David Lusseau
Journal:  Proc Biol Sci       Date:  2015-11-07       Impact factor: 5.349

Review 2.  A computational formulation of the behavior systems account of the temporal organization of motivated behavior.

Authors:  Federico Sanabria; Carter W Daniels; Tanya Gupta; Cristina Santos
Journal:  Behav Processes       Date:  2019-09-20       Impact factor: 1.777

Review 3.  A non-homogeneous hidden-state model on first order differences for automatic detection of nucleosome positions.

Authors:  Pei Fen Kuan; Dana Huebert; Audrey Gasch; Sunduz Keles
Journal:  Stat Appl Genet Mol Biol       Date:  2009-06-19

4.  Combining hidden Markov models for comparing the dynamics of multiple sleep electroencephalograms.

Authors:  Roland Langrock; Bruce J Swihart; Brian S Caffo; Naresh M Punjabi; Ciprian M Crainiceanu
Journal:  Stat Med       Date:  2013-01-24       Impact factor: 2.373

5.  On the application of mixed hidden Markov models to multiple behavioural time series.

Authors:  S Schliehe-Diecks; P M Kappeler; R Langrock
Journal:  Interface Focus       Date:  2012-02-01       Impact factor: 3.906

6.  Belief dynamics extraction.

Authors:  Arun Kumar; Zhengwei Wu; Xaq Pitkow; Paul Schrater
Journal:  Cogsci       Date:  2019-07

7.  Structure and dynamics of minke whale surfacing patterns in the Gulf of St. Lawrence, Canada.

Authors:  Fredrik Christiansen; Ned M Lynas; David Lusseau; Ursula Tscherter
Journal:  PLoS One       Date:  2015-05-13       Impact factor: 3.240

8.  Hidden Markov models reveal complexity in the diving behaviour of short-finned pilot whales.

Authors:  Nicola J Quick; Saana Isojunno; Dina Sadykova; Matthew Bowers; Douglas P Nowacek; Andrew J Read
Journal:  Sci Rep       Date:  2017-03-31       Impact factor: 4.379

9.  MapMySmoke: feasibility of a new quit cigarette smoking mobile phone application using integrated geo-positioning technology, and motivational messaging within a primary care setting.

Authors:  Robert S Schick; Thomas W Kelsey; John Marston; Kay Samson; Gerald W Humphris
Journal:  Pilot Feasibility Stud       Date:  2017-07-14
  9 in total

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